From: Jeff H. <jh...@de...> - 2012-04-24 14:41:47
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No problem on my MacBook Pro with Safari. Tried both with Jmol unsigned and ChemDoodle. Also fine with FireFox. *********************************************** Jeff Hansen Department of Chemistry and Biochemistry DePauw University 602 S. College Ave. Greencastle, IN 46135 jh...@de... *********************************************** On Apr 24, 2012, at 9:44 AM, Robert Hanson wrote: > Phil, could this be a local caching problem? I'm not seeing any problem with a vanilla Mac running Safari. All the .js files have been changed recently, and there are also new .jar files as well specifically for those actions. > > Other Mac users? http://chemapps.stolaf.edu/jmol/chemdoodle/test2.htm > > > > On Tue, Apr 24, 2012 at 6:21 AM, Philip Bays <pb...@sa...> wrote: > Bob: > On my Mac, I am getting some java i/o errors using the signed applet and the direct database calls; eg caffeine with map, 2-hexene smiles, aspirin. > > > On Apr 24, 2012, at 12:51 AM, Robert Hanson wrote: > >> Dear Jmol users, >> >> http://chemapps.stolaf.edu/jmol/chemdoodle/test2.htm >> >> Needs testing on iPads, iPhones, and Android tablet. >> >> I have all file types loading now, I think, including direct tapping into PubChem, NCI Resolver, and RCSB models and ligands all in Jmol and a slightly adapted subset of ChemDoodle. No links should cause errors. (Still waiting for one little hosting tweak at RCSB, which is requiring a bit of indirect server action for keyword searches.) >> >> In a Java applet environment, I can load PubChem models with charges (for MEP) directly from PubChem using a great new service they are rolling out soon. Most happy to beta test that for them! Interesting to compare the results with NCI. >> >> Full action requires a couple of files on a server. Which in this case is at St. Olaf. >> >> Paul Pillot and I are fast-tracking getting the rest of Jmol into an Object JavaScript format. A bit tricky, but one problem will be history: No more worry about waiting for the applet to load before sending it scripts. We'll just cache them until the applet is ready, then send them off automatically. That will be nice! >> >> Bob >> >> >> On Fri, Apr 13, 2012 at 12:03 AM, Robert Hanson <ha...@st...> wrote: >> OK. Please test! >> >> http://chemapps.stolaf.edu/jmol/chemdoodle/test2.htm >> >> -- adds loading of host-local file using >> >> MolGrabberJmol.loadFile(fileName,loadParams) >> >> of course, the loadParams business doesn't work with ChemDoodle, but perhaps it will supply reason to add such :) >> >> I notice that this does not work for machine-local (hard-drive-based) files in Chrome. I'm guessing that's a security setting. >> >> Also, actually, I couldn't get most of these to load into ChemDoodle. The CIF files seem to be unreadable in all cases, and when there is no WebGL, only MOL files are readable, not XYZ, PDB, or CIF. >> >> Kevin, now you have something to do! I'm hoping you can check that over and tell me what I'm doing wrong (actually, send me a corrected JmolCD.js!). Something odd in xxxInterpreters, I think. But I don't know what it would be. >> >> Bob >> >> >> -- >> Robert M. Hanson >> Professor of Chemistry >> St. Olaf College >> 1520 St. Olaf Ave. >> Northfield, MN 55057 >> http://www.stolaf.edu/people/hansonr >> phone: 507-786-3107 >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >> >> >> -- >> Robert M. Hanson >> Professor of Chemistry >> St. Olaf College >> 1520 St. Olaf Ave. >> Northfield, MN 55057 >> http://www.stolaf.edu/people/hansonr >> phone: 507-786-3107 >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> ------------------------------------------------------------------------------ >> Live Security Virtual Conference >> Exclusive live event will cover all the ways today's security and >> threat landscape has changed and how IT managers can respond. Discussions >> will include endpoint security, mobile security and the latest in malware >> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/_______________________________________________ >> >> Jmol-users mailing list >> Jmo...@li... >> https://lists.sourceforge.net/lists/listinfo/jmol-users > > J. Philip Bays > Emeritus Professor of Chemistry > Department of Chemistry and Physics > Saint Mary's College > Notre Dame, IN 46556 > pb...@sa... > > > > > > > ------------------------------------------------------------------------------ > Live Security Virtual Conference > Exclusive live event will cover all the ways today's security and > threat landscape has changed and how IT managers can respond. Discussions > will include endpoint security, mobile security and the latest in malware > threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ > _______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users > > > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > ------------------------------------------------------------------------------ > Live Security Virtual Conference > Exclusive live event will cover all the ways today's security and > threat landscape has changed and how IT managers can respond. Discussions > will include endpoint security, mobile security and the latest in malware > threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/_______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users |