From: <ha...@us...> - 2011-05-30 02:56:42
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Revision: 15510 http://jmol.svn.sourceforge.net/jmol/?rev=15510&view=rev Author: hansonr Date: 2011-05-30 02:56:36 +0000 (Mon, 30 May 2011) Log Message: ----------- version=12.1.48 # new feature: load spacegroup "" loads data with current file's space group # new feature: load unitcell "" loads data with current file's unit cell and offset # set appendNew false # LOAD DATA "append" # 1 # testing # Na 0.5 0 0.5 # end "append" {1 1 1} spacegroup "P4/mmm" unitcell "" # new feature: draw ARROW [ATOM {aa} | BOND {bb} {cc}] [ATOM {aa} | BOND {bb} {cc}] # -- allows easy creation of curved mechanistic arrows from atoms to bonds, # bonds to atoms, atoms to atoms, or bonds to bonds. # -- when atoms are moved, these arrows follow the atoms. # new feature: isosurface CONNECT {xxx} # -- connects an isosurface to an atom (only the first in the set) so that # If that atom is moved, then entire isosurface is moved. # -- STATE ISSUE: From the state, all isosurfaces are created AFTER atoms are moved, # so an isosurface such as a molecular surface will not be recreated properly from the state # new feature: show state FILE "filename" --- show embedded state from file (for example, an image) # new feature: MO POINTS / AO POINTS mapping onto a plane # for (var i = -5;i < 5;i += 0.2) {isosurface color range -1.0 1.0 plane x= @i map atomicorbital 4 3 1 points 1000;refresh} # bug fix: set appendNew false; load =1q0y; load APPEND =1crn causes exception # bug fix: lcaoCartoon does not get hidden when atom deleted # bug fix: isosurface mesh incompatible with fullylit and frontonly # bug fix: isosurface SELECT should also set model index # bug fix: navigate broken # bug fix: modelKit dragMinimizeAtom broken in 12.0.43 # bug fix: dragMinimize should select all non-fixed atoms if there are fixed atoms # bug fix: write @{"xxxx"} fails # bug fix: xmlns designations for jvxl and cml added to JVXL file creation # bug fix: isosurface ... map VDW -- mapping not saved in state # bug fix: CRYSTAL reader does not read vibrations for atoms with two-character symbols # bug fix: cartoons with hermite level do not reposition for atom position changes or trajectories # bug fix: isosurface plane x=-1 (with no spaces) not accepted # bug fix: x = write("VRML") should give VRML contents and not write to disk # bug fix: third oxygen atom in 5'-terminal phosphate was not assigned to backbone (e.g. 4tna.pdb) Modified Paths: -------------- trunk/Jmol/src/org/jmol/viewer/Jmol.properties Modified: trunk/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2011-05-30 02:55:47 UTC (rev 15509) +++ trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2011-05-30 02:56:36 UTC (rev 15510) @@ -5,7 +5,7 @@ # new feature: load spacegroup "" loads data with current file's space group # new feature: load unitcell "" loads data with current file's unit cell and offset - +# set appendNew false # LOAD DATA "append" # 1 # testing This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |