[Jmol-commits] SF.net SVN: jmol:[12787] branches/v11_8/Jmol/src/org/jmol

[<ha...@us...>]

Revision: 12787
          http://jmol.svn.sourceforge.net/jmol/?rev=12787&view=rev
Author:   hansonr
Date:     2010-04-08 13:43:39 +0000 (Thu, 08 Apr 2010)

Log Message:
-----------
version=11.8.23_dev # bug fix: atomSite incorrectly assigned in AtomSetCollection

Modified Paths:
--------------
    branches/v11_8/Jmol/src/org/jmol/adapter/smarter/AtomSetCollection.java
    branches/v11_8/Jmol/src/org/jmol/viewer/Jmol.properties

Modified: branches/v11_8/Jmol/src/org/jmol/adapter/smarter/AtomSetCollection.java
===================================================================
--- branches/v11_8/Jmol/src/org/jmol/adapter/smarter/AtomSetCollection.java	2010-04-08 13:09:05 UTC (rev 12786)
+++ branches/v11_8/Jmol/src/org/jmol/adapter/smarter/AtomSetCollection.java	2010-04-08 13:43:39 UTC (rev 12787)
@@ -933,7 +933,7 @@
       mat.set((float[]) biomts.get(i));
       for (int iAtom = iAtomFirst; iAtom < atomMax; iAtom++) {
         try {
-          int atomSite = atoms[i].atomSite;
+          int atomSite = atoms[iAtom].atomSite;
           if (addBonds)
             atomMap[atomSite] = atomCount;
           Atom atom1 = newCloneAtom(atoms[iAtom]);

Modified: branches/v11_8/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- branches/v11_8/Jmol/src/org/jmol/viewer/Jmol.properties	2010-04-08 13:09:05 UTC (rev 12786)
+++ branches/v11_8/Jmol/src/org/jmol/viewer/Jmol.properties	2010-04-08 13:43:39 UTC (rev 12787)
@@ -4,6 +4,7 @@
 
 version=11.8.23_dev
 
+# bug fix: atomSite incorrectly assigned in AtomSetCollection
 # bug fix: color hbonds ENERGY causes NPE when non-calculated HBonds are created
 # bug fix: simple model appended to model having unit cell does not show axes
 # bug fix: load "@x" does not preserve load options


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