[Jmol-commits] SF.net SVN: jmol:[12136] trunk/Jmol/src/org/jmol/modelset/AtomCollection. java

[<ha...@us...>]

Revision: 12136
          http://jmol.svn.sourceforge.net/jmol/?rev=12136&view=rev
Author:   hansonr
Date:     2010-01-15 08:43:59 +0000 (Fri, 15 Jan 2010)

Log Message:
-----------
version=11.9.19 # new feature: calculate hydrogens

Modified Paths:
--------------
    trunk/Jmol/src/org/jmol/modelset/AtomCollection.java

Modified: trunk/Jmol/src/org/jmol/modelset/AtomCollection.java
===================================================================
--- trunk/Jmol/src/org/jmol/modelset/AtomCollection.java	2010-01-15 08:37:51 UTC (rev 12135)
+++ trunk/Jmol/src/org/jmol/modelset/AtomCollection.java	2010-01-15 08:43:59 UTC (rev 12136)
@@ -1141,18 +1141,21 @@
         //                 sp3   sp3   sp3    sp   sp2 sp2
         switch (bondCount - nBonds) {
         case 1:
-          getHybridizationAndAxes(i, z, x, "sp3", false);
+          // sp3
+          getHybridizationAndAxes(i, z, x, "lpa", false);
           pt = new Point3f(z);
           pt.scaleAdd(1.1f, atom);
           hAtoms[i][hPt++] = pt;
           break;
         case 2:
+          // sp2
           getHybridizationAndAxes(i, z, x, "sp2c", false);
           pt = new Point3f(z);
           pt.scaleAdd(1.1f, atom);
           hAtoms[i][hPt++] = pt;
           break;
         case 3:
+          // sp
           getHybridizationAndAxes(i, z, x, "sp", false);
           pt = new Point3f(z);
           pt.scaleAdd(1.1f, atom);


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