Re: [Jmol-users] Scripting color selection and view all for multiple overlayed files

[Robert H. <ha...@st...>]

color blue

not

color = blue


On Thu, Jul 23, 2009 at 2:58 PM, Ian Stokes-Rees <
ijs...@cr...> wrote:

>  I am trying to load two PDB files, color them differently, and show both
> of them.  I can now do 2 of the 3, but not 3 at once.  I expect the problem
> lies with a missing "select" or "frame" statement, but my best guesses as to
> how to do this have not revealed a solution.  Suggestions are welcome.  My
> current script looks like:
>
>   jmolApplet(400, 'load FILES "A.pdb" "B.pdb"; cpk off; wireframe off;
> cartoon; select model=1.1; color red; select model=2.1; color=blue; select
> all; frame 0.0');
>
> This shows the first structure A.pdb in red, but B.pdb is only displayed
> after I explicitly select it via the Jmol menu, and it turns up grey instead
> of blue (grey is actually fine).
>
> Ian
>
> --
> Ian Stokes-Rees                            W: http://sbg...@cr...               T: +1 617 432-5608 x75
> SBGrid, Harvard Medical School             F: +1 617 432-5600
>
>
>
>
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-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900