From: 张. Z. Z. ) <nic...@gm...> - 2009-04-21 14:46:20
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Hello jmol-users: How can I select one of residues when the chain IDs are same, just as below(part of an PDB file): ATOM 11 N ASP L 1A 60.262 29.089 14.012 1.00 33.13 N ATOM 12 CA ASP L 1A 59.378 30.016 14.691 1.00 35.05 C ATOM 13 C ASP L 1A 57.965 29.526 14.760 1.00 31.74 C ATOM 14 O ASP L 1A 57.476 28.873 13.851 1.00 36.72 O ATOM 15 CB ASP L 1A 59.593 31.557 14.587 1.00 41.32 C ATOM 16 CG ASP L 1A 58.724 32.268 13.564 1.00 46.17 C ATOM 17 OD1 ASP L 1A 57.452 32.455 13.924 1.00 47.60 O ATOM 18 OD2 ASP L 1A 59.188 32.658 12.472 1.00 48.99 O ATOM 19 N CYS L 1 57.321 29.802 15.860 1.00 22.52 N ATOM 20 CA CYS L 1 56.005 29.353 16.036 1.00 15.35 C ATOM 21 C CYS L 1 55.351 30.160 17.077 1.00 15.83 C ATOM 22 O CYS L 1 56.002 30.636 17.968 1.00 18.73 O ATOM 23 CB CYS L 1 56.053 27.903 16.554 1.00 11.00 C ATOM 24 SG CYS L 1 56.917 27.711 18.163 1.00 11.39 S residue ASP's chain ID and CYS's chain ID are same, they use icode(icode of ASP is A and icode of CYS has no icode) to be seperated. Now, I want so select residue ASP, the script is below: "select 1A:L; color blue;" but it can not work. and I changed the script to be this: "select 1:L; color blue;" and residue CYS is selected, not ASP. So, can I write scripts to select the residue ASP not CYS? Can you help me? thank you very much! best wishes Zengming Zhang ,nic...@gm... 2009-04-21 Tel: +86-0571-86971772 Mobile:+86-13408688196 MSN: nic...@gm... QQ: 454705936 |