From: Bob H. <ha...@st...> - 2006-02-03 16:24:46
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The current method for what Tamas is interested in is: #load the full set load <filename>; #display just the reference select (*);wireframe off;spacefill off model all select (*/1);wireframe 0.1 #display another model select (*/2);wireframe 0.1 #hide that one and display the next select (*/2);wireframe off select (*/3);wireframe 0.1 #hide that one and display the next select (*/3);wireframe off select (*/4);wireframe 0.1 etc. That is, display all models, then select out the ones you want. But that does not get around the memory issue, I think. Bob Miguel wrote: >>Miguel wrote: >> >> >>>I suspect that anything that is small enough to run >>>through a molecular dynamics simulation is too small >>>to worry about. > > > Bob wrote: > >>:) Oh, don't be so sure.... We are talking proteins here, >>with, perhaps thousands of dynamic states! > > > Tamas wrote: > >>In case of a slightly bigger protein (170 aa) it is >>26 MB compressed. And I >>have many 600 aa long proteins. > > > > I stand corrected. > > I was under the impression that it was too computationally intensive to > generate thousands of states with this number of atoms. > > Thanks for clarifying. > > I suppose I should stick to writing code ;-) > > > Miguel > > > > ------------------------------------------------------- > This SF.net email is sponsored by: Splunk Inc. Do you grep through log files > for problems? Stop! Download the new AJAX search engine that makes > searching your log files as easy as surfing the web. DOWNLOAD SPLUNK! > http://sel.as-us.falkag.net/sel?cmd_______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson, ha...@st..., 507-646-3107 Professor of Chemistry, St. Olaf College 1520 St. Olaf Ave., Northfield, MN 55057 mailto:ha...@st... http://www.stolaf.edu/people/hansonr "Imagination is more important than knowledge." - Albert Einstein |