From: Miguel <mi...@jm...> - 2005-08-16 00:21:13
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> I would like to display a movie of the conformational > motion, but I do not want to have to create an additional > PDB file that is simply a cat'ed version of all the other > output files, as this will essentially double the amount > of space each run requires. Please explain your concern about doubling the amount of space. For the size data that you are working with, disk space is effectively fr= ee. Client performance and network bandwidth are more important. > Does anyone know if it is possible with scripting to load > each of my conformers sequentially, and then display them as an > animation? Someone else asked the same question. I recently changed the code so that loading a new molecule does not clear= the old molecule. Therefore, a script that simply alternates load and delay script commands should work load =22x000=22; delay 0.5; load =22x001=22; delay 0.5; load =22x002=22; delay 0.5; You must interleave calls to either 'delay' or 'refresh', otherwise the script will keep running and the display will not get updated. > A results similar to the anim command would be desirable. > Otherwise, I think we'll need to hack something > with php and rpc in order to dynamically create > and destroy a concatenated file for viewing. I suggest: - create the catted file statically - Don't worry about the space - Compress everything with gzip. Miguel ----- Open Source Molecular Visualization www.jmol.org miguel=40jmol.org ----- |