[OBO-Edit Working Group] web service from 'ontology generation tool' dead?

[Carreres B. <car...@fr...>]

Hello every one,


Using a linux OS, and the latest beta13 of OboEdit (also tried the b12, rpm and sh), I am trying to use the "ontology generation tool", but it seems that the webservice is unreachable.
I have been looking for the reason, and the endpoint reference from the soap is missing (or maybe it has been moved).

If I try to reach the endpoint : http://projects.biotec.tu-dresden.de/DOG4DAG/services/GoPubMedTermGeneration
Results in:
-------------------------------------------------------------------------
<soapenv:Reason>
  <soapenv:Text xml:lang="en-US">
The endpoint reference (EPR) for the Operation not found is /DOG4DAG/services/GoPubMedTermGeneration and the WSA Action = null
  </soapenv:Text>
</soapenv:Reason>
-------------------------------------------------------------------------

According to the documentation from the authors of the tool, the EPR did not change and is given on that page:
http://projects.biotec.tu-dresden.de/DOG4DAG/services/listServices
So there is something wrong with the webservice...


Maybe I am wrong, so below is the error given by OboEdit from the terminal.

I believe this problem is persisting for few month, but it was working in September 2010.

Thanks in advance for your help,

Best regards.

Benoit


-------------------------------------------------------------------------
Term generation failed.
org.apache.axis2.AxisFault: Transport error: 404 Error: /GoPubMedTermGenerationService/services/GoPubMedTermGeneration.GoPubMedTermGenerationHttpSoap12Endpoint/
	at org.apache.axis2.transport.http.HTTPSender.handleResponse(HTTPSender.java:296)
	at org.apache.axis2.transport.http.HTTPSender.sendViaPost(HTTPSender.java:190)
	at org.apache.axis2.transport.http.HTTPSender.send(HTTPSender.java:75)
	at org.apache.axis2.transport.http.CommonsHTTPTransportSender.writeMessageWithCommons(CommonsHTTPTransportSender.java:371)
	at org.apache.axis2.transport.http.CommonsHTTPTransportSender.invoke(CommonsHTTPTransportSender.java:209)
	at org.apache.axis2.engine.AxisEngine.send(AxisEngine.java:448)
	at org.apache.axis2.description.OutInAxisOperationClient.send(OutInAxisOperation.java:401)
	at org.apache.axis2.description.OutInAxisOperationClient.executeImpl(OutInAxisOperation.java:228)
	at org.apache.axis2.client.OperationClient.execute(OperationClient.java:163)
	at de.tud.biotec.gopubmedTermGenerationService.client.GoPubMedTermGenerationStub.generateConceptsFromPubMedQuery(GoPubMedTermGenerationStub.java:1014)
	at org.oboedit.gui.components.ontologyGeneration.OntologyGenerationComponent$TermGenerationServiceWorker.doInBackground(OntologyGenerationComponent.java:2860)
	at org.oboedit.gui.components.ontologyGeneration.OntologyGenerationComponent$TermGenerationServiceWorker.doInBackground(OntologyGenerationComponent.java:2803)
	at org.jdesktop.swingworker.SwingWorker$1.call(Unknown Source)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
	at org.jdesktop.swingworker.SwingWorker.run(Unknown Source)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
	at java.lang.Thread.run(Thread.java:636)
Terms generated for PubMed query 'test'