DownloadConverts DNA or amino-acid feature GFF3 coordinates contained within sub-features (e.g. ORF/CDS) to coordinates relative to the parent sub-features (e.g. contig/scaffold). Also includes tools for proteogenomic gene validation and gene discovery.
Features
- Converts DNA or amino-acid feature GFF3 coordinates contained within sub-features (e.g. ORF/CDS) to coordinates relative to the parent sub-features (e.g. contig/scaffold).
- Includes tools to compare mapped proteogenomic peptide data to gene-annotations for validation and gene discovery
- reports frameshift errors in CDS annotations
- reports potential exon-boundary errors in CDS annotations
- reports potential new genes (proteogenomic peptides non-overlapping with gene annotations)
Follow CDSmapper
You Might Also Like
Red Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of CDSmapper!