[Cdk-user] inconsistency in ready molfiles

[Tim D. <tdu...@gm...>]

Hi All,

I encountered an inconsistency when reading MDL molfiles.
What works for the MDLV2000Reader blows up for the MDLV3000Reader with 
an NPE.
This is illustrated in this GIST:
https://gist.github.com/tdudgeon/08a858da05c958527242

Note: if I use the reader to read a single molecule using:
IAtomContainer mol = reader.read(new AtomContainer())
it works OK, which would be OK in this particular case, but I suppose 
the behaviours should be consistent.

Tim