From: SourceForge.net <no...@so...> - 2009-03-13 11:21:32
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Project Maintainance Tasks item #2686064, was opened at 2009-03-13 07:21 Message generated for change (Tracker Item Submitted) made by Item Submitter You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=631143&aid=2686064&group_id=20024 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Rajarshi Guha (rajarshi) Assigned to: Egon Willighagen (egonw) Summary: pharmacophore update Initial Comment: been updating the pharmcophore code a bit. The primary change is to create a subclass of QueryAtomContainer called PharmacophoreQuery that will allow us ot consider things such as excluded volumes. The previous form of the code did not allow us to do this. While it does add a new class, code that uses the pharmacophore classes only needs to be updated by changing QueryAtomContainer (or IQueryAtomContainer) to PharmacophoreQuery. Everything else should stay the same. Other changes also include updating to JDK 1.5 idioms and addition of tests and annotations. This branch is based of the SF master, so I request a review and subsequent merge into master. You can pull these updates from me by doing git pull git://rguha.ath.cx/cdk pcore ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=631143&aid=2686064&group_id=20024 |