Re: [Cdk-devel] Shouldn't SMARTS matcher mach the indole SMILES on indole?

[Egon W. <ego...@gm...>]

On Fri, Jun 6, 2008 at 8:19 PM, Rajarshi Guha <rg...@in...> wrote:
>>> Ah, that's the reason... the N of indole is not SP2, but PLANAR3...
>>
>> the first contributes one electron via its pz orbital (as left over
>> after three sp2 hybridizations), while the second contributes two
>> electrons (a lone pair).
>
> But the debugger is showing it to be N.sp2

And it should be a PLANAR3 N...

Egon

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