From: Noel O'B. <bao...@gm...> - 2008-05-21 07:19:53
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That's really nice Rajarshi. I'll get in touch regarding including RDKit. These sorts of cross-comparisons are very quick to find bugs/limitations. Do you have a similar test suite for SMILES by any chance? Noel 2008/5/21 Rajarshi Guha <rg...@in...>: > -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA1 > > Hi, I thought this might be interesting for both groups, hence the > cross-post. > > I used the Daylight SMARTS examples plus a few extra (158 cases in > total) to compare the SMARTS matching performance (i.e., correctness > and not speed) of CDK, OB and OEChem. They compare pretty well and > the failures for CDK and OEChem are easily rationalized, though I > don't know much about the OB implementation to comment > > http://cheminfo.informatics.indiana.edu/~rguha/code/smartscomp/ > > - ------------------------------------------------------------------- > Rajarshi Guha <rg...@in...> > GPG Fingerprint: D070 5427 CC5B 7938 929C DD13 66A1 922C 51E7 9E84 > - ------------------------------------------------------------------- > I'm related to people I don't relate to." > -Calvin > > > -----BEGIN PGP SIGNATURE----- > Version: GnuPG v1.4.8 (Darwin) > > iEYEARECAAYFAkgzmb0ACgkQZqGSLFHnnoT2bQCg7E9ynz81gJ2lBSvZLzNlyVA4 > dWcAn3EG50aW5jE5mXLJ3IgVQLfBbVgD > =oKfp > -----END PGP SIGNATURE----- > > ------------------------------------------------------------------------- > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > _______________________________________________ > OpenBabel-Devel mailing list > Ope...@li... > https://lists.sourceforge.net/lists/listinfo/openbabel-devel > |