[Cdk-commits] SF.net SVN: cdk: [9402] branches/cdk-1.0.x/src/org/openscience/cdk/test/io/ MDLReaderTest.java

[<sh...@us...>]

Revision: 9402
          http://cdk.svn.sourceforge.net/cdk/?rev=9402&view=rev
Author:   shk3
Date:     2007-11-07 10:52:02 -0800 (Wed, 07 Nov 2007)

Log Message:
-----------
added a test case for bug #1826577

Modified Paths:
--------------
    branches/cdk-1.0.x/src/org/openscience/cdk/test/io/MDLReaderTest.java

Modified: branches/cdk-1.0.x/src/org/openscience/cdk/test/io/MDLReaderTest.java
===================================================================
--- branches/cdk-1.0.x/src/org/openscience/cdk/test/io/MDLReaderTest.java	2007-11-07 17:46:05 UTC (rev 9401)
+++ branches/cdk-1.0.x/src/org/openscience/cdk/test/io/MDLReaderTest.java	2007-11-07 18:52:02 UTC (rev 9402)
@@ -35,6 +35,7 @@
 import org.openscience.cdk.ChemModel;
 import org.openscience.cdk.ChemObject;
 import org.openscience.cdk.Molecule;
+import org.openscience.cdk.PseudoAtom;
 import org.openscience.cdk.interfaces.IAtom;
 import org.openscience.cdk.interfaces.IAtomContainer;
 import org.openscience.cdk.io.MDLReader;
@@ -163,4 +164,18 @@
         assertEquals(28, ((IAtomContainer)containersList.get(1)).getBondCount());
     }
     
+    /**
+     * @cdk.bug 1826577
+     */
+    public void testHisotopes() throws Exception {
+        String filename = "data/mdl/hisotopes.mol";
+        logger.info("Testing: " + filename);
+        InputStream ins = this.getClass().getClassLoader().getResourceAsStream(filename);
+        MDLReader reader = new MDLReader(ins);
+        ChemFile chemFile = (ChemFile)reader.read((ChemObject)new ChemFile());
+        assertNotNull(chemFile);
+        List containersList = ChemFileManipulator.getAllAtomContainers(chemFile);
+        assertFalse(((IAtomContainer)containersList.get(0)).getAtom(1) instanceof PseudoAtom);
+        assertFalse(((IAtomContainer)containersList.get(0)).getAtom(1) instanceof PseudoAtom);
+    }    
 }


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