Re: [Avogadro-Discuss] segfault or reading ABINIT file

[David L. <dav...@ki...>]

Hi Ron,

Thanks for the report. Is this issue fixed by the patch you sent, or
is this a separate issue?

Dave

On Mon, Apr 29, 2013 at 2:12 PM, Cohen, Ron <rc...@ca...> wrote:
> The reproducible error is:
>
> New Thread 0x40200940 (LWP 14602)]
> Settings are missing for the next engines: ()
> QStackedLayout::setCurrentWidget: Widget 0x1086190 not contained in stack
> dev warning: Extension "GAMESS" is using a deprecated DockWidget
> loading method. See Extension::dockWidgets() documentation.
> dev warning: Extension "Orbitals" is using a deprecated DockWidget
> loading method. See Extension::dockWidgets() documentation.
> dev warning: Extension "Vibration" is using a deprecated DockWidget
> loading method. See Extension::dockWidgets() documentation.
> No matching basis set file found:  "/home/rcohen/untitled.cml"
> GLWidget initialisation...
> GLWidget initialised...
> createObjects()
> [New Thread 0x40401940 (LWP 15450)]
> [New Thread 0x40602940 (LWP 15451)]
> [Thread 0x40401940 (LWP 15450) exited]
> [Thread 0x40602940 (LWP 15451) exited]
> [New Thread 0x40602940 (LWP 17304)]
>
> Program received signal SIGSEGV, Segmentation fault.
> [Switching to Thread 0x40602940 (LWP 17304)]
> OpenBabel::ABINITFormat::ReadMolecule (this=<optimized out>,
> pOb=<optimized out>, pConv=0x40601b50)
>     at /home/rcohen/SRC/openbabel/src/formats/abinitformat.cpp:188
> 188           atom->SetAtomicNum(atomicNumbers[type]);
> The abinit output file is attached. Ron
>
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