Re: [Apbs-users] How can I map electrostatic potential onto solvent accessible area of a certain at
Biomolecular electrostatics software
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From: Ran F. <r.f...@bi...> - 2007-11-15 17:06:01
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Sorry: http://www.dino3d.org/ Ran Friedman wrote: > Hi, > > A not so difficult option is to use dino: > sem...@ka... > > See their tutorials. The program is able to write a uhbd map. > > Hope that helps, > Ran. > > Semin Lee wrote: > >> Hi, >> >> I'm trying to map electrostatic potential onto solvent accessible area >> of every atom in a protein. >> >> Visualizing surface potentials using VMD or PyMol was straightforward, >> but I'm not quite sure about how to get actual electrostatic potential >> assigned to solvent accessible area of each atom. >> >> Is there any easy way to do this? >> >> Thanks in advance. >> >> Semin >> >> >> ------------------------------------------------------------------------- >> This SF.net email is sponsored by: Splunk Inc. >> Still grepping through log files to find problems? Stop. >> Now Search log events and configuration files using AJAX and a browser. >> Download your FREE copy of Splunk now >> http://get.splunk.com/ >> _______________________________________________ >> apbs-users mailing list >> apb...@li... >> https://lists.sourceforge.net/lists/listinfo/apbs-users >> >> >> > > > -- ------------------------------------------------------ Ran Friedman Postdoctoral Fellow Computational Structural Biology Group (A. Caflisch) Department of Biochemistry University of Zurich Winterthurerstrasse 190 CH-8057 Zurich, Switzerland Tel. +41-44-6355593 Email: r.f...@bi... Skype: ran.friedman ------------------------------------------------------ |