Re: [apbs-users] problem reading .dx file into multivalue

[Chang, C. <Chr...@nr...>]

On Mac OSX 10.6,

stc:~ cchang$ cat temp
a   b   c  d
stc:~ cchang$ sed -E "s/ +/,/g" < temp
a,b,c,d

Should work wherever sed is offered.

From: Boaz Shaanan [mailto:boa...@gm...]
Sent: Tuesday, February 19, 2013 6:24 AM
To: apb...@li...
Subject: [apbs-users] problem reading .dx file into multivalue

Hi,

I'm trying to use multivalue (in the share/apbs/tools/bin directory) for getting potential values around some atoms. However, as explained by the program (when typing "multivalue") it expects  commas as separator between values in the .dx file. The .dx file produced by apbs-1.4 (and presumably earlier versions too) has spaces between values. What can be done about that? Editing a .dx file to replace spaces by commas sounds ludicrous. Please advise.

   Thanks,

            Boaz

--
Boaz Shaanan, Ph.D.
Dept. of Life Sciences
Ben-Gurion Unviersity of the Negev