Search Results for "factor analysis"
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Showing 29 open source projects for "factor analysis"
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PHP dotenv
Loads environment variables automatically
You should never store sensitive credentials in your code. Storing configuration in the environment is one of the tenets of a twelve-factor app. Anything that is likely to change between deployment environments, such as database credentials or credentials for 3rd party services, should be extracted from the code into environment variables. Basically, a .env file is an easy way to load custom configuration variables that your application needs without having to modify .htaccess files or Apache... -
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Sentry
Cross-platform application monitoring and error tracking software
Sentry is a cross-platform, self-hosted error monitoring solution that helps software teams discover, monitor and fix errors in real-time. The most users and logs will have to provide are the clues, and Sentry provides the answers. Sentry offers enhanced application performance monitoring through information-laden stack traces. It lets you build better software faster and more efficiently by showing you all issues in one place and providing the trail of events that lead to errors. It also... -
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BioXTAS RAW
Processing and analysis of Small Angle X-ray Scattering (SAXS) data.
BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF as well as electron density reconstructions using DENSS. It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis... -
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AtteStat
The package for statistical data analysis and applied mathematics
The high performance open source package for statistical data analysis and applied mathematics AtteStat is an add-in for all desktop versions of the Microsoft Excel spreadsheets for Windows. Both 32-bit and 64-bit in one package. The combination of the unsurpassed convenience of spreadsheets and the effective interception of Microsoft Excel exceptions (frontend) and the maximum speed of the C programming language (backend). Winner of contest Microsoft Office Extensions (PC Magazine RE... -
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Criterial
The package for statistical data analysis and applied mathematics
The high performance open source package for statistical data analysis Criterial is an add-in for all desktop versions of the LibreOffice Calc spreadsheets on any 64bit operating systems (UNIX, Linux, Windows). The combination of the unsurpassed convenience of spreadsheets as frontend and the maximum speed of the C programming language as backend. Contains user experience and the best ideas of projects AtteStat and StatAnt. Completely free. No donation required. Criterial comes... -
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StatAnt
The cross-platform package for statistical data analysis
The high performance open source package for statistical data analysis StatAnt is a standalone cross-platform application. Completely free. No donation required. StatAnt comes with absolutely no warranty. -
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DAPS4
A Fortran code for design and analysis of ring-stiffened shells
DAPS4e is an updated version of a Fortran code by John Renzi for design and analysis of monocoque and ring-stiffened circular cylindrical shells. The following failure modes are considered: • Shell stresses and displacements at mid-bay and ring-frames. • Ring-frame stress. • Axisymmetric collapse (AC). • Elastic and Inelastic Interbay Buckling. (EIB and IIB). • Elastic and Inelastic Monocoque Instability (EMI and IMI). • Elastic and Inelastic General Instability (EGI and IGI). • Ring... -
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MutaNET
NGS Pipeline and Automated Mutation Analysis
MutaNET comes with a next generation sequencing (NGS) pipeline that calls mutations based on paired-end NGS reads, an automated mutation analysis tool and various file converters and mergers. The mutation analysis feature considers the coding region, protein domains, regulation and transcription factor binding site information, and can be used to analyse the potential impact of mutations on antibiotic resistance. -
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gas-github
sync gas code to github
... the Google Drive API, so you don't need any google authentication. Moreover, this extension supports Bound scripts. Support two-factor authentication (GitHub, GitHub Enterprise only). Work with directory(with slash in filename). Support GitHub Organizations, Bitbucket Teams and GitLab Groups. Google Apps Script native UI. Option to change filetype from .gs to .js when uploading to SCM. Option to add ignore file pattern. -
Yooz provides the smartest, most powerful, and easiest-to-use cloud-based E-invoicing and Purchase-to-Pay automation solution. It delivers unmatched savings, speed, and security with affordable zero-risk subscriptions to more than 5,000 customers and 300,000 users worldwide.
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The intellectual system of Eidos
http://lc.kubagro.ru/
http://lc.kubagro.ru/ http://lc.kubagro.ru/aidos/index.htm http://lc.kubagro.ru/aidos/_Aidos-X.htm On the IBM PC, the Eidos system started working in 1992. MS Windows has been running since 2012. Implemented in Alaska+Express. I want to try to translate some modes, and maybe all of them, to the Harbor. The full source text in a single file is here: http://lc.kubagro.ru/__AIDOS-X.txt Responsible Secretary Kubgau scientific journal, Professor of computer science Department Kubgau... -
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TauFactor
MatLab App for calculating the tortuosity factor of microstructure
Please contact the author at sjc08@ic.ac.uk for any questions or if you wish to cite this application in a academic study. Journal paper available here: http://www.sciencedirect.com/science/article/pii/S2352711016300280 TauFactor is a MatLab application for efficiently calculating the tortuosity factor, as well as volume fractions, surface areas and triple phase boundary densities, from image based microstructural data. The tortuosity factor quantifies the apparent decrease in diffusive... -
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CodelPlant
Codelplant stat. multi-regression M-learning for leaves segmentation
CodelPlant is based on the creation of a statistical multi-regression decision tree from data obtained by pixel RGB-HSB machine learning analysis. The model is training with human observation, so the human factor is being entered the process. -
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PWMScan
A Web-based genome-wide Position Weight Matrix (PWM) Scanner
PWMScan is used to scan a position weight matrix (PWM) against a genome or, in general, a large set of DNA sequences. The PWM is the most commonly used mathematical model to describe the DNA binding specificity of a transcription factor (TF). A PWM contains scores for each base at each position of the binding site. The TF binding score for a given k-mer sequence is then obtained by simply adding up the base-specific scores at respective positions of the binding site. PWMScan takes as input... -
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This project stores all the updates to the SPSS R Menu described in the paper: Mário Basto, José Manuel Pereira: “An SPSS R-Menu for Ordinal Factor Analysis”, Journal of Statistical Software, Vol. 46, Issue 4, Jan 2012, http://www.jstatsoft.org/v46/i04 For difficulties concerning the installation of the Menu in SPSS, see the paper of Matthew Courtney at http://pareonline.net/pdf/v18n8.pdf
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AXYZ
Newsfeed aggregator
The article explains the design and the characteristics of a new open source content aggregation system. Among the features of the program, stands out a new processing engine of syndication channels, monitoring capability of information recovery in real time, the possibilities of the configuration of aggregator behavior, automatic classification of contents and new models for representation of information from relational interactive maps. On the other hand, the aggregation program, which... -
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... implemented units are then automatically integrated with the rest of the library. The base of available algorithms is steadily increasing and includes signal processing methods (Principal Component Analysis, Independent Component Analysis, Slow Feature Analysis), manifold learning methods ([Hessian] Locally Linear Embedding), several classifiers, probabilistic methods (Factor Analysis, RBM), data pre-processing methods, and many others.
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ChEnMTD
Calculate the number of theoretical trays with McCabe-Thiele method
Use the McCabe-Thiele method to calculate the number of theoretical trays in a distillation column operated under the conditions specified. It has tools for data analysis to obtain empirical or semi-empirical equilibrium models. You can even use cubic splines. This project uses icons of "Open Icon Library" https://sourceforge.net/projects/openiconlibrary/ -
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BAGEL: analysis of gene knockout screens
BAGEL: Bayesian Analysis of Gene EssentiaLity
BAGEL: software for Bayesian analysis of gene knockout screens using pooled library CRISPR or RNAi. BAGEL is a Bayesian classifier for pooled library genetic perturbation screens, using either CRISPR-Cas9 or shRNA libraries. It uses training sets of known essential and nonessential genes to estimate what the fold change distribution of an essential or nonessential gene should look like. Then, for each uncharacterized gene, it takes all observations of reagents targeting that gene (guide RNA... -
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Gumbo
An HTML5 parsing library in pure C99
Gumbo is an implementation of the HTML5 parsing algorithm implemented as a pure C99 library with no outside dependencies. It's designed to serve as a building block for other tools and libraries such as linters, validators, templating languages, and refactoring and analysis tools. Gumbo gains some of this by virtue of being written in C, but it is not an important consideration for the intended use-case, and was not a major design factor. Gumbo is intentionally designed to turn an HTML document... -
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MetTailor
MetTailor: Dynamic Block Summary and Data Normalization for Robust Ana
Mass spectrometry-based quantitative metabolomics (LC-MS or GC-MS) requires accurate peak alignment and adaptive normalization, both of which have known limitations in the current data extraction software packages. MetTailor is a software package that performs post-extraction processing steps such as cross-sample realignment and data normalization that are specifically designed to account for the experimental factors from chromatographic separation and MS analysis. The two major components... -
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iMir
Integrated pipeline for HT miRNA-Seq data analysis
Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular... -
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fedtool
Tool to aid factorial design analysis of in vitro experiments.
Sets of colour-coded design templates for varying number of factors and replicates are included covering full factorial, and fractional factorial designs. An Excel-spreadsheet tool steps the user through specifying factor names and entering the design and data from the experiment. The tool deconvolutes the data into a matrix which can be pasted into data visualisation and / or data analysis software. -
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TFAST
Software for analysis of afSELEX-seq data
Transcription Factor Analysis using SELEX with High-Throughput Sequencing (TFAST) is software developed by the Mobley lab at the University of Michigan designed to assist with transcription factor binding site discovery using data generated from aptamer-free SELEX-seq (afSELEX-seq). -
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inhibitomev1
A systems-level host-factor survey of viral proteins that modulate inn
.... These protein complexes were analysed by mass spectrometry (MS) and integrated into a protein interaction map for deep bioinformatic and network analysis. Selected number of candidates were further functionally validated. -
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A Model for transcription factor turnover as described in PMID:X. This model was developed for analysis of the Rap1 transcription factor in yeast (S. cerevisiae), though it is theoretically applicable to most dynamic interactions with DNA.