Open Source Java Scientific/Engineering Software - Page 3

Mimosa is a modeling and simulation platform, covering the process from building conceptual models to running the simulations. The specification uses ontologies and an extensible set of formalisms for the dynamics. The simulation kernel is based on DEVS.

The GDL editor is multiplatform application that allows users to create, edit and run GDL files. GDL is a formal language designed to represent clinical knowledge for decision support. It is designed to be natural language- and reference terminology- agnostic by leveraging the designs of openEHR Reference Model and Archetype Model. The tool provides an editing and testing environment capable of generating forms based on the elements defined in the GDL. Requirements: Java Runtime Enviroment (JRE) 1.6 or higher

HidroSIG is a GIS that supports raster and vectorial maps with modules oriented to the hydrological analysis, time series, remote sensing and more. It has been made 100% in java using VisAD for data visualization and using MySQL to storage all data.

JPARSEC is a Java Package of Astronomical Resources for Standard Ephemerides Calculations, focused on accuracy, documentation, 2D/3D charts, realistic planetary rendering, and Astrophysical modeling. For source code visit http://conga.oan.es/~alonso/

The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users.

Java and ColdFusion libraries to lookup country code and language from IP address. It uses a local copy of the WHOIS database to perform fast, accurate lookups of country codes. Useful for log analysis, internationalization, geolocation, etc..

ALTER is a web-based tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.

Ganzúa is a cryptanalysis tool for classical ciphers (mono and polyalphabetic) that lets the user define almost completely arbitrary cipher and plain alphabets, allowing for the proper cryptanalysis of cryptograms obtained from non-English texts.

Heart (Hydrological and Environmental Analysis and Reporting Tool) is a raster-based GIS-like app for the analysis of hydrological parameters and the generation of associated reports.

KartoMNT is a free software of height model digitalization. This software allows you to create your own Digital Height Models (DHM) with a simple map. Then you'll be able to visualize DHMs with the KartoMNT 3D viewer.

ORE (Ontology Rule Editor) is a platform-independent application to manage the use of inference rules defined on a model represented by an ontology. ORE offers a easy, well-guided and intiutive GUI to define and test these inference rules.

Petri-LLD is a graphical development environment for real-time automation control and is written in Java. It is based on a form of Petri net, and compiles to a number of programmable logic controller (PLC) languages as well as Java and Visual Basic.

Sciense Searcher is a system that lets you search, organize and share bibliographic cites of research articles, books, booklets, collections, manuals, thesis, proceedings, technical reports, unpublished publications and misc.

SystemDynamics is a graphical Java application for modeling, visualization and execution of System Dynamics models.

The Java Web Translator library provides automatic language translation to the client's locale. Automatic language translation for 14 languages is supported including English, Espańol, Français, Italiano, Deutsch, Greek, Chinese, Japanese, Russian,. .

The jgrass project has been moved to http://www.jgrass.org

leXkit: a client-server dictionary edition environment, that makes editing easier for the lexicographer, who hasn’t to be aware of technical issues. Entry meta-information is used to provide advanced functionality, such as context-dependent tasks.

AMASBE (Advanced Multi Agent System Bullwhip Effect) is a bullwhip-effect control system for supply chains based on forecasts that uses Java Agent DEvelopment Framework (JADE).

Agua Y Fuego is a graphic application written in Java Swing / JavaFX that captures and displays temperature readings from Sentilla Perk sensors.

Aplicación móvil multiplataforma, pensada para localizar zonas donde el aparcamiento está permitido, en un principio gratis como descampados, o zonas donde encontrar hueco es fácil y no gratuitas como Parkings de pago. También permitirá comunicar atascos en tiempo real, indicar puntos negros en carreteras, zonas conflictivas (en las que se produzcan robos, etc...) y puntos de interés como talleres, restaurantes y aéreas de servicio. La aplicación se basa en la geo-localización de los Smartphone y necesita la ayuda de una comunidad que quiera subir localizaciones de aparcamientos, además se pretende añadir más utilidades como la de informar de lugares donde suele haber controles policiales, donde pongan multas.

Automatic Conversion Tool for Accessible Web (ACTAW) is a project that tries to improve the Web Accessibility in an automatic way. ACTAW applies the WAI guidelines 1.0 defined by the World Wide Web Consortium (W3C). Developed in Java.

Proyecto de investigación científica sobre teoría del caos y fractales, su desarrollo empezó en el año 2008, siendo liderado por un grupo de estudiantes y profesores de la Universidad Industrial de Santander.

BioWebAuth (Biometrics for Web Authentication) is an open source Java framework intended to provide single sign-on web authentication based on BioAPI-compliant biometric software or devices. It uses the JA-SIG Central Authentication Service architecture.

You can download the Color Mod at the Biogenesis main site too (included in the main download now). You also find the sourcecode there. If you want to post a review, remember that this is only a modification, so comment on my changes, not on the simulation. Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion forum: https://sourceforge.net/p/biogenesis/discussion/ Biogenesis runs faster (at least for myself) if you open a Google Chrome window (don´t know why :D)

BorealSE is a simulation engine writen in Java that aims to be a platform for distributed discrete event simulation models. It also aims to incorporate the ideas and benefits of OOP so that simulation models can be written on top of reusable components.