Activity for David Hill
-
David Hill posted a comment on ticket #11769
Done.
-
axon vs. nerve fiber
-
Hi Marc, Go ahead and assign the autophagy terms directly to me. I will add these...
-
Autophagy
-
refinement of septin ring structures
-
missing links and relationships in the BDNF-TRKB receptor signalling pathway and parent
-
I agree. -D
-
Hi Jane! I'm going to assign this to DOS for comment because he is working on synaptic...
-
NTR: nicotinic acetylcholine receptor activity
-
Hi Tanya, It seems to me that this should be related (narrow synonym?) to walking...
-
Assigning to Tanya.
-
APC complexed with inhibitor
-
protein acetyltransferase activity grouping term
-
Hi Val, From what is there now, the regulation of the CDK is a part of the transition...
-
MP regulation of cyclin-dependent protein serine/threonine pk activity involved in.....
-
Definition of GO:0072655 establishment of protein localization to mitochondrion?
-
For now I will change the def as suggested above. I think movement is correct in...
-
BP for glo3
-
OK. I finished cleaning up what we had. When the time comes to add the remaining...
-
Hi Antonia, After conferring with Tanya, I have decided to go with option 2. I have...
-
Hi Antonia, It seems that there are a lot of annotations to the current pathway that...
-
NTR- phosphatidylinositol-5-phosphate biosynthetic process
-
Definition of GO:0072655 establishment of protein localization to mitochondrion?
-
BP for glo3
-
difference between inflammasome and pyroptosome?
-
Hi Paul, If you look at the children of this term, some of them specify where in...
-
To discuss on the next call, should I: 1) Change the name of 'GO:0098779 activation...
-
I made the term mitochondrion disassembly. Let me know if that doesn't work. name:...
-
New term request - placeholder - “mitochondrion degradation”
-
Broaden definition of GO:0000422 mitochondrion degradation?
-
name: mitophagy xref: Wikipedia:Mitophagy is_a: GO:0007005 {is_inferred="true"} !...
-
OK. I think I have covered everything here. Here is a partial diff, omitting any...
-
Autophagy
-
Chris, Assigning to you. I think this is ok if we can get a GOCHE ID for it. -D
-
NTR: Thymidylate synthase inhibitor binding
-
Autophagy
-
Merged the fusion and maturation terms. Here is the pasted diff just in case we need...
-
Restrict GO:0006914 autophagy to eukaryotes
-
Taxon restriction added.
-
I agree with Tanya. Some of them are interesting though. It looks like they were...
-
replaced-by cardinality violations
-
[Term] +id: GO:0061716 +name: miRNA export from nucleus +namespace: biological_process...
-
NTR: "miRNA export from nucleus" and "miRNA transporter activity"
-
NTR: miRNA 2'-O-methylation
-
[Term] +id: GO:0061715 +name: miRNA 2'-O-methylation +namespace: biological_process...
-
NTR: Thymidylate synthase inhibitor binding
-
NTR: miRNA 2'-O-methylation
-
NTR: "miRNA export from nucleus" and "miRNA transporter activity"
-
New term request
-
Paula, We currently have the 'leukotriene receptor activity' as a child of 'G-protein...
-
Relationship edits in Cardiac conduction ontology
-
Hi Val, I put a request in the ChEBI SF tracker to look at the parentage of nucleotide...
-
ChEBI:47784 is_a ChEBI:36976?
-
NTR: folic acid receptor activity
-
Hi Becky, I think this sounds perfectly reasonable given your previous work/knowledge...
-
Possible NTR: anterior neural tube closure
-
[Term] +id: GO:0061713 +name: anterior neural tube closure +namespace: biological_process...
-
Hi Ingrid, Here are the terms. Let me know if you need anything else. [Term] +id:...
-
NTR: MF terms for EC reactions 2.7.7.87, 2.3.1.234, 2.8.4.5
-
Hi Rachael and Hadil and Rebecca, What about as a child of receptor activity and...
-
Parentage of methotrexate binding
-
Agreed and added. -D
-
puberty
-
Although this seems strange to me. I think it fits, so I added it. -D
-
OK. I will make the edits now and paste the diff here. Then you can let me know if...
-
Hi Pascale, Let's work on the existing terms. What about the defs? Combining with...
-
Hi Pascale, Yes. Let's skype. From the definition, it sounds like this is not an...
-
NTR: folic acid receptor activity
-
Parentage of methotrexate binding
-
puberty
-
axon vs. nerve fiber
-
Hi Pascale, I still think that based on the definitions, these terms make sense....
-
Turns out 'endoplasmic reticulum degradation' was added to the ontology previously...
-
Since the axon and the myelin sheath are parts of two different cells and would be...
-
Autophagy
-
Autophagy
-
[Term] -id: GO:0034273 -name: ATG1/UKL1 signaling complex -namespace: cellular_component...
-
[Term] +id: GO:0061709 +name: reticulophagy +namespace: biological_process +def:...
-
Possible NTR: anterior neural tube closure
-
The neuropores are the openings at the ends of the neural tube as the tube closes....
-
Scanning the literature it looks as though the chaperone acts to deliver copper to...
-
Question about F-P link from GO:0016532 superoxide dismutase copper chaperone activity
-
Based on the definitions and placement in the graph, this relationship is correct....
-
Question about F-P GO:0045031 (ATP-activated nucleotide receptor activity)
-
Added the do not annotate tag.
-
Add do_not_manually_annotate tag to metabolic process
-
name: neuron projection terminus namespace: cellular_component def: "The specialized,...
-
nerve terminal
-
More def changes id: GO:0000046 name: autophagosome fusion namespace: biological_process...
-
nerve terminal
-
ntr: tRNA-5-taurinomethyluridine 2-sulfurtransferase
-
[Term] +id: GO:0061708 +name: tRNA-5-taurinomethyluridine 2-sulfurtransferase +namespace:...
-
Yay. An example for a regulation chain. However, this one is tricky. The mechanism...
-
Proposal to revise naming for transcriptional repressors & add a few grouping classes
-
I am a bit concerned that transcriptional repressor activity still represents a vague...
-
Hi Val, You can establish localization of something by degrading it in one place...
-
Hi Val, Back to this again. To make this consistent with other parts of the ontology...
-
Began edits. Still need to do the merge and finish editing the definitions. [Term]...
-
MP: GO:0006094 gluconeogenesis
-
Thanks Peter. I will reject this one. -D
1 >