cubic_parcellation.py is refined to allow for binarized input file, such as group_level_GM_mask.nii
fix a bug in lag_structure.py
fix a bug in lag_structure.py
a script for analyzing patterns of lag structure was added.
cubic parcellation for binary masks, e.g. GM mask, to combine neighboring voxels into parcels. Please try the code for details.
Two matlab scripts are included. Please refer to comment in each script for its specific function
two folders created. one for matlab scripts, the other python scripts. useful command lines for fmriprep, xcpd, qsiprep will be added to command-lines.txt for convenience
remove redundant files