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Yongchao Liu
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Personal Data
Username:
nkcslyc
Joined:
2009-01-07 14:08:32
Location:
Hangzhou / China / CST
Gender:
Male
Web Site:
http://yongchao-liu.github.io
Projects
This is a list of open source software projects that Yongchao Liu is associated with:
CUDA-MEME
Ultrafast scalable motif discovery algorithm using GPU computing
Last Updated:
2020-09-14
CUDASW++: Smith-Waterman Algorithm
The fastest Smith-Waterman protein database search algorithm on GPUs
Last Updated:
2023-04-07
CUPBB
A Compute Unified Parallel Building Blocks Library Using GPU Computing
Last Updated:
2023-04-11
CUSHAW2: Parallel Gapped Read Alignment
One of the leading short-/long-read aligner to large genomes
Last Updated:
2023-04-11
CUSHAW3: Accurate Short-read Alignment
Last Updated:
2023-04-11
CUSHAW: CUDA-based Short Read Alignment
the first aligner introducing a complete paired-end alignment on GPUs
Last Updated:
2023-04-11
DecGPU: CUDA-based Error Correction
The first distributed and parallel short-read error corrector on GPUs
Last Updated:
2023-04-11
LightPCC
Parallel pairwise correlation computation on Intel Xeon Phi clusters
Last Updated:
2023-04-19
LightSpMV
lightweight GPU-based sparse matrix-vector multiplication (SpMV)
Last Updated:
2023-04-19
MSA-CUDA: multiple sequence aligner
multiple sequence alignment on CUDA-enabled GPUs.
Last Updated:
2023-04-10
MSAProbs: Multiple Sequence Alignment
One of the most accurate multiple protein sequence aligners
Last Updated:
2023-04-10
Musket - short read error corrector
a parallel short-read error corrector for Illumina sequencing
Last Updated:
2023-04-11
PASHA: Parallelized Short Read Assembly
One of the fastest parallel short read assemblers for large genomes.
Last Updated:
2023-04-11
ParaBWT - parallel BWT construction
a parallel and space-efficient Burrows-Wheeler transfrom constructor
Last Updated:
2023-04-11
SWAPHI-LS: Alignment on Xeon Phi Cluster
Smith-Waterman long DNA sequence alignment on Xeon Phi clusters
Last Updated:
2023-04-11
SWAPHI: Smith-Waterman on Intel Xeon Phi
The first protein sequence database search on shared-host Xeon Phis
Last Updated:
2023-04-11
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