Personal Data
- Username:
- nkcslyc
- Joined:
- 2009-01-07 14:08:32
- Location:
- Hangzhou / China / CST
- Gender:
- Male
- Web Site:
Projects
This is a list of open source software projects that Yongchao Liu is associated with:
- CUDA-MEME Ultrafast scalable motif discovery algorithm using GPU computing Last Updated:
- CUDASW++: Smith-Waterman Algorithm The fastest Smith-Waterman protein database search algorithm on GPUs Last Updated:
- CUPBB A Compute Unified Parallel Building Blocks Library Using GPU Computing Last Updated:
- CUSHAW2: Parallel Gapped Read Alignment One of the leading short-/long-read aligner to large genomes Last Updated:
- CUSHAW3: Accurate Short-read Alignment Last Updated:
- CUSHAW: CUDA-based Short Read Alignment the first aligner introducing a complete paired-end alignment on GPUs Last Updated:
- DecGPU: CUDA-based Error Correction The first distributed and parallel short-read error corrector on GPUs Last Updated:
- LightPCC Parallel pairwise correlation computation on Intel Xeon Phi clusters Last Updated:
- LightSpMV lightweight GPU-based sparse matrix-vector multiplication (SpMV) Last Updated:
- MSA-CUDA: multiple sequence aligner multiple sequence alignment on CUDA-enabled GPUs. Last Updated:
- MSAProbs: Multiple Sequence Alignment One of the most accurate multiple protein sequence aligners Last Updated:
- Musket - short read error corrector a parallel short-read error corrector for Illumina sequencing Last Updated:
- PASHA: Parallelized Short Read Assembly One of the fastest parallel short read assemblers for large genomes. Last Updated:
- ParaBWT - parallel BWT construction a parallel and space-efficient Burrows-Wheeler transfrom constructor Last Updated:
- SWAPHI-LS: Alignment on Xeon Phi Cluster Smith-Waterman long DNA sequence alignment on Xeon Phi clusters Last Updated:
- SWAPHI: Smith-Waterman on Intel Xeon Phi The first protein sequence database search on shared-host Xeon Phis Last Updated: