lpryszcz

Thanks Sergey, it did the trick! https://github.com/alekseyzimin/masurca/issues/8#issuecomment-374885969 Any idea why the error occured? Greetings from Waw! L. L. On 20 March 2018 at 17:37, Sergey Koren skoren@users.sourceforge.net wrote: CA support ended in 2016. You should contact the MaSuRCA support team instead. Are you specifying doFragmentCorrection=0 in the MaSuRCA config? That is not going to work, it's a CA option not a MaSuRCA option. You need to run the CA command MaSuRCA is running but...

Hi, I'm having similar issue in v2.3.4 and unfortunately your tweak doFragmentCorrection=0 doesn't work:/ Any other solutions? Error line 55 of configuration file 'configuration.txt': Invalid line 'doFragmentCorrection=0'