User Activity

  • Posted a comment on discussion General Discussion on HipMer

    In this version you can treat them as different libraries, i.e. make two lib_seq entries for each file and give different library names, but assign the same setID of 1 so that they're used together for scaffolding. You can enter the same insert size/sdev for both - the pipeline will recalculate it later anyway, so these are treated as just fallback estimates. In the next release all this will be handled automatically. Hope this helps.

  • Posted a comment on discussion General Discussion on HipMer

    Hi Si, This sounds like a compiler version issue. What version of gcc are you running?...

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Personal Data

Username:
egoltsman
Joined:
2014-08-05 17:22:01
Location:
Oakland / United States / PDT

Projects

This is a list of open source software projects that Eugene Goltsman is associated with:

  • HipMer A High performance distributed memory assembler for big genomic data Last Updated:
  • Project Logo Meraculous-2D Eukaryotic Genome Assembler Last Updated:

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