David

Just for me to know that: would a non convergence result in an error message in the log file? Or is there a specific convergence warning that I could look for? Thanks

This seems to be the case... I don't know why I had an option different from the default. I'll check all remaining subjects. Thanks a lot!

sorry, the links did not work: subject-1: https://drive.switch.ch/index.php/s/t4Vi6vnH940zhoO subject-2: https://drive.switch.ch/index.php/s/jSsMaRHVFSx42DI

Hi, I've been running the antsCorticalThickness.sh pipeline for >100 subjects [1], and noticed that there are two very different type of posterior segmentation results. Some subjects have a nice probabilistic output (see example subject-1), whereas for others it is much more "binary" and not so accurate (subject-2, color scale identical to subject-1). The data come from the same scanner, were processed on the same HPC using identical software versions. I used my own population-based 6-tissue priors...

Thanks for your thorough investigation ! I'll look at antsMVTC.sh then.

Hi Nick, thanks for the feedback. Does this mean that it happens only with my dataset...

Great, looking forward.

I sent you a link to the data at your corresponding author email address from the...