Alternatives to StrandOmics
Compare StrandOmics alternatives for your business or organization using the curated list below. SourceForge ranks the best alternatives to StrandOmics in 2024. Compare features, ratings, user reviews, pricing, and more from StrandOmics competitors and alternatives in order to make an informed decision for your business.
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Labguru
BioData
Labguru is a secure, cloud-based Electronic Lab Notebook (ELN), LIMS and informatics platform which offers a complete solution for life science research and industry. It records and manages laboratory data and inventory, includes molecular biology tools and chemistry tools, enables automation of the lab, insight into lab data making labs run more efficiently. With Labguru, scientists can design experiments and workflows, capture structured and unstructured data, manage projects, and share their work. Customizable experiment templates, integration of protocols, SOPs, and other cutting-edge features help to increase data quality, streamline workflows and reduce costs. Labguru is available on desktops and mobile devices via the cloud. Labguru is part of Holtzbrinck Publishing Group and serves over 100,000 scientists worldwide from startups, universities, research institutes up to some of the largest pharma companies. -
2
OmicsBox
BioBam Bioinformatics S.L.
OmicsBox is a leading bioinformatics solution that offers end-to-end data analysis of genomes, transcriptomes, metagenomes, and genetic variation studies. The application is used by top private and public research institutions worldwide and allows researchers to easily process large and complex data sets, and streamline their analysis process. It is designed to be user-friendly, efficient, and with a powerful set of tools to extract biological insights from omics data. The software is structured in different modules, each with a specific set of tools and functions designed to perform different types of analysis, such as de-novo genome assemblies, genetic variation analysis, differential expression analysis, and taxonomic classifications of microbiome data, including the functional interpretation and rich visualizations of results. The functional analysis module includes the popular Blast2GO annotation methodology and makes OmicsBox particularly suited for non-model organism researchStarting Price: €100/month/seat -
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IDBS Polar
IDBS
Meet IDBS Polar, the world’s first BioPharma Lifecycle Management (BPLM) platform, eliminating repetitive manual tasks, allowing you to efficiently execute your processes while curating the data you need to accelerate time to market by tackling the biggest challenges in process design, optimization, scale-up, and technology transfer. Interactive data analytics applications, such as bioreactor comparison designed specifically for biopharma development scientists. IDBS Polar is a platform that securely manages drug progression in contexts of workflow, integration, and insight. Workflows designed to simplify the BioPharma Lifecycle with process-aware planning, design, and execution of end-to-end bioprocess and analytical unit operations. Integrations that bring meaning to your data. Rapid integration into your development ecosystem, enabling automation and curating a process-centric data backbone. -
4
L7|ESP
L7 Informatics
L7 Enterprise Science Platform (L7|ESP®) is a unified platform that contextualizes data and eliminates business silos via process orchestration. It's a comprehensive solution that facilitates the digitalization of data and scientific processes in life sciences organizations. L7|ESP has native applications, including L7 LIMS, L7 Notebooks, L7 MES, L7 Scheduling, and more. It can integrate with existing third-party applications, lab instruments, and devices to capture all data in a single data model. It has a low-code/no-code workflow designer and hundreds of pre-built connectors to enable rapid time-to-value and end-to-end automation. By leveraging a single data model, L7|ESP enables advanced bioinformatics, AI, and ML to offer novel scientific and operational insights. L7|ESP addresses data and lab management needs in life sciences, particularly in: ● Research and Diagnostics ● Pharma and CDMO ● Clinical Sample Management Resource Center: l7informatics dot com/resource-center -
5
Pluto
Pluto Biosciences
Since its founding in 2021 from the Wyss Institute at Harvard University, Pluto has become a trusted partner of life sciences organizations around the country ranging from biotech start-ups to public biopharma companies. Our cloud-based platform gives scientists the ability to manage all of their data, run bioinformatics analyses, and create interactive and publication-quality visualizations. The platform is currently being used for a wide variety of biological applications, from preclinical / translational science research, to cell and gene therapies, drug discovery and development, to clinical research. -
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QIAGEN CLC Genomics Workbench
QIAGEN Digital Insights
QIAGEN CLC Genomics Workbench is a powerful solution that works for everyone, no matter the workflow. Cutting-edge technology and unique features and algorithms widely used by scientific leaders in industry and academia make it easy to overcome challenges associated with data analysis. User-friendly bioinformatics software solutions allow for comprehensive analysis of your NGS data, including de novo assembly of whole genomes and transcriptomes, resequencing analysis (WGS, WES and targeted panel support), variant calling, RNA-seq, ChIP-seq and DNA methylation (bisulfite sequencing analysis). Analyze your RNA-seq and small RNA (miRNA, lncRNA) data with easy-to-use transcriptomics workflows for differential expression analysis at gene and transcript levels. QIAGEN CLC Genomics Workbench is developed to support a wide range of NGS bioinformatics applications. -
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Metabolon
Metabolon
At Metabolon, we offer the largest Level 1 library in the metabolomics industry. Our proprietary library has been built and curated over 20 years and contains over 5,400 entries. The vast majority of entries in our library are Level 1 attributing approximately 85% (~4,600 entries); however, some are Level 2 (approximately 15% accounting for around 800 entries) due to a lack of commercial standards available to qualify for Level 1. Metabolon delivers accurate, highly actionable insights for our clients’ scientific or clinical inquiries due to our unmatched library breadth and industry-leading annotation confidence levels. Metabolomics applies to a wide range of research, from soil health to food nutrition and preclinical research to clinical trials. Whether you’re searching for trends in a group or refining an individual’s treatment, metabolomics can help you find answers to important questions. -
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VSClinical
Golden Helix
VSClinical allows for the clinical interpretation of variants based on ACMG & AMP guidelines. The VSClinical guided workflow enables following the American College of Medical Genetics (ACMG) guidelines used to identify and classify causal variants for inherited disease risk, cancer predisposition, and the diagnosis of rare diseases. The ACMG/AMP joint guidelines for variant interpretation provide a set of criteria to score variants and place them into one of five classification tiers. Following the guidelines requires deep diving into the annotations, genomic context, and existing clinical assertions about every variant. VSClinical provides a tailored workflow to score each relevant criterion while also providing all the bioinformatic, literature and evidence from clinical knowledgebases to assist in the scoring and interpretation process. VSClinical is designed to allow variant scientists to efficiently process variants. -
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Geneyx
Geneyx
Geneyx Analysis is a comprehensive solution for next-generation sequencing (NGS) data that can scale the process of FASTQ to clinical reports for hospital and commercial labs. This advanced platform integrates machine learning and AI-based features to identify novel biomedical insights, while also improving diagnostic yields and turnaround times. By providing a fully transparent and intuitive solution, Geneyx Analysis enables clinicians and researchers to have complete control over data analysis and alleviates the complexities of regulating in-house bioinformatics pipelines. Protocols can be fully customized to accommodate gene panels, exomes, and genomes, and our comprehensive annotation engine supports the analysis of all genetic variants including structural and copy number variations as well as regulatory elements. Together, Geneyx Analysis automates the diagnostic process from sequencer to report, while creating a comprehensive resource for novel variant discovery. -
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Scitara DLX
Scitara
Scitara DLX™ offers a rapid connectivity infrastructure for any instrument in the life science laboratory in a fully compliant and auditable cloud-based platform. Scitara DLX™ is a universal digital data infrastructure that connects any instrument, resource, app and software in the laboratory. The cloud-based, fully auditable platform connects all data sources across the lab, allowing the free flow of data across multiple end points. This allows scientists to devote their time to scientific research, not waste it solving data issues. DLX curates and corrects data in flight to support the development of accurate, properly structured data models that feed AI and ML systems. This supports a successful digital transformation strategy in the pharma and biopharma industries. Unlocking insights from scientific data enables faster decision-making in drug discovery and development, helping bring drugs to market more quickly. -
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Qlucore Omics Explorer
Qlucore
Qlucore Omics Explorer is so easy to use that you no longer have to depend on an expert in bioinformatics to explore and analyze your Omics and NGS data sets. Qlucore Omics Explorer is a D.I.Y next-generation bioinformatics software for research in life science, plant- and biotech industries, as well as academia. The powerful and flexible visualization-based data analysis tool with inbuilt powerful statistics delivers immediate results and provides instant exploration and visualization of big data. The software is developed to allow the workflow which best suits you and your experiments and maximizes the outcome of your research. By combining instant visualization with powerful statistics and flexible selection methods, you will be able to see your results immediately. As a user, you decide your own workflow and starting point. You are in control and can tailor the exploration to meet your specific needs. -
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Benchling
Benchling
Legacy R&D software is a drain on scientific potential. It slows down R&D progress, scatters data across silos, and wipes out institutional knowledge. Benchling is the industry’s leading life sciences R&D cloud. Accelerate, measure, and forecast R&D – from discovery through bioprocessing – all in one place. A suite of seven natively unified applications that accelerate R&D at all levels. Codeless configuration, open integration, and dashboards tailored to your needs. Deep life science R&D and consulting expertise ensure ongoing success. Benchling is a unified R&D platform, so you spend less time entering and hunting for data, and more time working together to move your research forward. Scientists, managers, and executives can optimize R&D output with complete visibility into experimental context, program performance, and resource utilization. -
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Correlation Engine
Illumina
Correlation Engine is an interactive omics knowledgebase that puts private omics data in a biological context with highly curated public data. One of the largest biological databases in the world, Correlation Engine provides life science researchers with unprecedented access to vast numbers of high-quality whole-genome analyses and insightful scientific tools. The knowledgebase enables novel discoveries by interrogating billions of data points derived from standardized analyses of whole genome studies. A suite of applications to determine biological context, a continually growing library of curated data sets, and support for multiple species and multi-omic datasets. Utilize a simple graphical user interface to leverage guided workflows, push-button applications, and APIs. Accelerate your journey from omic data to decision and get access to over 25,000 multi-omics studies (from over 250,000 signatures) that have been reanalyzed. -
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Saama
Saama
Actionable insights, driven by the industry's #1 AI-powered clinical analytics platform, enable your teams to manage risk and improve performance across studies, systems, sites, and vendors. State-of-the-art clintech from Saama is designed to streamline your workflows, automate time-consuming processes, and improve collaboration across clinical operations, medical review, data management, biostatistics, and pharmacovigilance. Sponsors and CROs rely on Saama for data aggregation and artificial intelligence solutions that lead to better decision-making, eliminate delays, and significantly shrink drug development costs and timelines. Saama can put you on the fast track to clinical trial process innovation. When all your clinical data is in one place and updated in real time, life’s much easier for your ClinOps and medical review teams. Data Managers have been underappreciated for too long. Eliminate manual work so they can pay attention to the data points that matter. -
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LatchBio
LatchBio
Stop wresting with cloud infrastructure and broken informatics tools. Start discovering biological insights today. Scientific discovery is bottlenecked by the fragmentation of tooling across biology and bioinformatics teams. We built a harmonized bioinformatics platform between wet lab and dry lab in the cloud to help teams accelerate their R&D. Import raw data from your cloud, your service provider, or your team's instruments. Develop and deploy custom bioinformatics workflows in any language. Stop wrestling with your infrastructure. Easily run any workflow and keep a log of every analysis. Ready-to-go interactive visualizations for NGS data with point-and-click plots. Latch supports integration with your organization’s AWS S3. Access hundreds of terabytes of data in an organic filesystem you are familiar with. Define bioinformatics workflows and dynamically generate no-code interfaces using Python with tunable compute and storage. -
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Geneious
Geneious
Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype microsatellite traces with automated ladder fitting and peak calling and generates tables of alleles. Beautiful visualizations of annotated genomes and assemblies are displayed in a highly customizable sequence view. Powerful SNP variants analysis, simple RNA-Seq expression analysis, and amplicon metagenomics. Design and test PCR and sequencing primers and create your own searchable primer database. Geneious Biologics is a flexible, scalable, and secure way to streamline your antibody analysis workflows, create high-quality libraries and select the optimal therapeutic candidates.Starting Price: $1,280 per year -
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Alissa Interpret
Agilent Technologies
Alissa Interpret is your universal genomic data interpretation software for clinical decision support. Increase your productivity, shorten the turnaround time, and maintain regulatory compliance with Alissa Interpret’s agnostic CGH and NGS tertiary analysis platform for variant interpretation and reporting. Achieve complete operational efficiency when pairing Alissa Interpret with Agilent’s fully optimized SureSelect NGS reagents, intuitive secondary NGS analysis Alissa Reporter, Magnis walkaway automation, and TapeStation QC for a streamlined NGS data analysis workflow. External and internal curated variant knowledgebases at your fingertips. Automated variant interpretation solution accelerates CGH and NGS tertiary analysis. One platform for SNVs, InDels, CNVs, LOH, and fusions. Integrate with your LIMS and eliminate genomic data analysis bottlenecks. Connect with peers, share knowledge, and improve diagnostic yield. -
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Emedgene
Illumina
Emedgene streamlines your tertiary analysis workflows for rare disease genomics and other germline research applications. Emedgene is designed to accelerate the time and certainty in user-defined variant interpretation, prioritization, curation, and research report generation. Enable greater efficiency from your tertiary analysis workflows with explainable AI (XAI) and automation supporting genomes, exomes, virtual panels, and targeted panels. Unify your laboratory and NGS instrumentation with your IT systems to simplify and secure your complete workflow. Confidently keep pace with evolving science, technology, and demand with up-to-date knowledge graph options, curation capabilities, and a team of experts to support your journey. Increase throughput without increasing headcount using explainable AI (XAI) and automated workflows. Implement a high throughput WGS, WES, virtual panel, or targeted panel workflow that is integrated into your lab's digital ecosystem. -
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SnapGene
SnapGene
Accurately design and simulate cloning procedures. Test complicated projects, catch errors before they happen, and obtain the right constructs the first time. Cloning is easier when you can see what you are doing. The intuitive interface offers you unparalleled visibility into your work, simplifying often complex tasks. SnapGene automates documentation, so you don’t have to. See and share every sequence edit and cloning procedure that led to your final plasmid. Improve your core molecular biology procedures, and improve your results. Master SnapGene and key concepts in cloning with our new online learning center, SnapGene Academy. Containing over 50 video tutorials taught by scientific experts, SnapGene Academy helps you advance your skills across multiple molecular biology courses. SnapGene 7.2 provides a new visualization of primer homodimer structures and enhancements to file management, allowing tabs to be organized in multiple windows using drag and drop.Starting Price: $295 per year -
20
Amazon Omics
Amazon
Securely combine the multiomic data of individuals with their medical history to deliver more personalized care. Use purpose-built data stores to support large-scale analysis and collaborative research across entire populations. Accelerate research by using scalable workflows and integrated computation tools. Protect patient privacy with HIPAA eligibility and built-in data access and logging. Amazon Omics helps healthcare and life science organizations and their software partners store, query, and analyze genomic, transcriptomic, and other omics data and then generate insights from that data to improve health and advance scientific discoveries. Store and analyze omics data for hundreds of thousands of patients to understand how omics variation maps to phenotypes across a population. Build reproducible and traceable clinical multiomics workflows to reduce turnaround times and increase productivity. Integrate multiomic analysis into clinical trials to test new drug candidates’ efficacy. -
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Partek Flow
Partek
Partek bioinformatics software delivers powerful statistical and visualization tools in an easy-to-use interface. Researchers of all skill levels are empowered to explore genomic data quicker and easier than ever before. We turn data into discovery®. Pre-installed workflows and pipelines in our intuitive point-and-click interface make sophisticated NGS and array analysis attainable for any scientist. Custom and public statistical algorithms work in concert to easily and precisely distill NGS data into biological insights. Genome browser, Venn diagrams, heat maps, and other interactive visualizations reveal the biology of your next-generation sequencing and array data in brilliant color. Our Ph.D. scientists are always just a phone call away and ready to help with your NGS analysis any time you have questions. Designed specifically for the compute-intensive needs of next-generation sequencing applications with flexible installation and user management options. -
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g.nome
Almaden Genomics
g.nome, a cloud-native platform that delivers streamlined, scalable, and interoperable workflows for next-generation sequencing analysis. g.nome provides a low-code/no-code pipeline build. With pre-built workflows and toolkits from a curated library, g.nome is giving power to researchers — enabling them to import custom code, handle big datasets reliably, and optimize team collaboration from anywhere. With g.nome, long-time barriers linked to workflow language, process flow visibility, and quality control are removed. All that’s left are streamlined, scalable, and interoperable genomic workflows — leaving research teams to do what they do best: focus on the science. -
23
G6GFINDR System
G6G Tech
g6gTech, Inc. is a software development company that creates in-depth search products in the bioinformatics and artificial intelligence (AI) fields. We have recently changed our name from the G6G Consulting Group to emphasize our focus on creating products. Powered by semantic annotation, the new G6GFINDR System searches an expanding database of bioinformatics and artificial intelligence software using a two-step process that allows you to fine tune your search. The system used the previously developed Directory of Omics and Intelligent Software as a core starting point. We will be expanding the database of searched products at an accelerating rate. All products in the database have been carefully curated. The G6GFINDR System uses cookies to automatically collect information about your activities to optimize results. The G6GFINDR System is created by g6gTech, Inc.Starting Price: $9.95/month/user -
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Dotmatics
Dotmatics
Dotmatics is the global leader in R&D scientific software that connects science, data, and decision-making. Combining a workflow and data platform with best-of-breed applications, we offer the first true end-to-end solutions for biology, chemistry, formulations, data management, flow cytometry, and more. Trusted by more than 2 million researchers from the world’s leading biopharma, chemicals and materials enterprises, and academic institutions, we are dedicated to working with the scientific community to help make the world a healthier, cleaner and safer place to live. Learn more about our platform and products, including GraphPad Prism, Geneious, SnapGene, Protein Metrics, LabArchives, and more. -
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Cytobank
Beckman Coulter Life Sciences
Cytobank is a cloud-based platform for the analysis, storage, and sharing of flow and mass cytometry data. Cytobank is completely on the Internet and requires only a web browser and an account for access. There is otherwise no installation, updating, or maintenance of any other software or hardware necessary in order to use Cytobank. Ideal for single researchers or small groups. Shared Cloud. Ideal for large research groups, pharma and biotech R&D teams, and clinical research organizations. Private cloud, access controlled by an administrator role of your choosing. Larger compute caps around functionality such as viSNE. -
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StarDrop
Optibrium
With its comprehensive suite of integrated software, StarDrop™ delivers best-in-class in silico technologies within a highly visual and user-friendly interface. StarDrop™ enables a seamless flow from the latest data through predictive modeling to decision-making regarding the next round of synthesis and research, improving the speed, efficiency, and productivity of the discovery process. Successful compounds require a balance of many different properties. StarDrop™ guides you through this multi-parameter optimization challenge to target compounds with the best chance of success, saving you time and resources by enabling you to synthesize and test fewer compounds. -
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Illumina Connected Analytics
Illumina
Store, archive, manage, and collaborate on multi-omic datasets. Illumina Connected Analytics is a secure genomic data platform to operationalize informatics and drive scientific insights. Easily import, build, and edit workflows with tools like CWL and Nextflow. Leverage DRAGEN bioinformatics pipelines. Organize data in a secure workspace and share it globally in a compliant manner. Keep your data in your cloud environment while using our platform. Visualize and interpret your data with a flexible analysis environment, including JupyterLab Notebooks. Aggregate, query, and analyze sample and population data in a scalable data warehouse. Scale analysis operations by building, validating, automating, and deploying informatics pipelines. Reduce the time required to analyze genomic data, when swift results can be a critical factor. Enable comprehensive profiling to identify novel drug targets and drug response biomarkers. Flow data seamlessly from Illumina sequencing systems. -
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Signals Research Suite
PerkinElmer Informatics
Secure and scalable, the Suite features a modern, intuitive interface that offers scientists complete control in configuring workflows for every technique, modality, and data type. Signals VitroVivo 3.0 (formerly Signal’s Screening) easily transforms raw data into actionable results and Signals Inventa 3.0 (formerly Signals Lead Discovery) is the next-gen analytics software that enables researchers to seamlessly publish results from disparate data sources. Experimental data capture, materials management, and collaboration workflows in a user-friendly cloud-based electronic notebook. Flexible visual and automatable instrument data processing to drive data quality and reproducibility. Unified data management for scientific results combined with rich interactive analytics. Extensibility to integrate with internal and partner systems and processes. -
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BioTuring Browser
BioTuring Browser
Explore hundreds of curated single-cell transcriptome datasets, along with your own data, through interactive visualizations and analytics. The software also supports multimodal omics, CITE-seq, TCR-seq, and spatial transcriptomic. Interactively explore the world's largest single-cell expression database. Access and query insights from a single-cell database of millions of cells, fully annotated with cell type labels and experimental metadata. Not just creating a gateway to published works, BioTuring Browser is an end-to-end solution for your own single-cell data. Import your fastq files, count matrices, Seurat, or Scanpy objects, and reveal the biological stories inside them. Get a rich package of visualizations and analyses in an intuitive interface, making insight mining from any curated or in-house single-cell dataset become such a breeze. Import single-cell CRISPR screening or Perturb-seq data, and query guide RNA sequences.Starting Price: Free -
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SOPHiA GENETICS
SOPHiA GENETICS
Our global data-sharing network generates clinically actionable insights from data to improve patient outcomes worldwide. SOPHiA GENETICS’ mission is to build the future of AI-assisted medicine. We are integrating multimodal healthcare-omics data, unlocking the existing data silos, and developing machine learning models to produce actionable insights that could eventually support healthcare professionals to improve patient outcomes. The revamped interface, new features, and cutting-edge capabilities are set to further accelerate precision medicine workflows, bringing us another step closer to democratizing data-driven medicine. Powered by AI and machine learning (ML), our global cloud-based platform provides a safe, secure, and instantly accessible environment to standardize, compute, and analyze digital health data, generating insights from complex multimodal data sets that have the potential to improve diagnosis, therapy selection, analysis, and drug development. -
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GeoMx Digital Spatial Profiler (DSP)
nanoString
Quickly resolve tissue heterogeneity and the complexity of microenvironments with the GeoMx Digital Spatial Profiler (DSP), the most flexible and robust spatial multi-omic platform for analysis of FFPE and fresh frozen tissue sections. GeoMx is the only spatial biology platform that non-destructively profiles the expression of RNA and protein from distinct tissue compartments and cell populations with an automated and scalable workflow that integrates with standard histology staining. Spatially profile the whole transcriptome and 570+ protein targets separately or simultaneously from your choice of sample inputs: whole tissue sections, tissue microarrays (TMAs), or organoids. Make GeoMx DSP your spatial biology platform of choice for biomarker discovery and hypothesis testing. Decide where to draw the line and let the tissue be your guide with biology-driven profiling that empowers you to choose the tissue microenvironments and cell types that matter most to you. -
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Universal Analysis Software (UAS) provides a platform for analyzing and managing forensic genomic data, simplifying complex bioinformatics. The UAS is an all-inclusive solution, containing analysis modules supporting all current ForenSeq workflows including ForenSeq MainstAY, ForenSeq Kintelligence, ForenSeq DNA Signature Prep, ForenSeq mtDNA Whole Genome, and ForenSeq mtDNA Control Region. UAS rapidly generates FASTQ files, performs alignment, and calls forensically relevant variants from NGS data. Extensive testing backs highly reliable variant calls to deliver accurate results in a user-friendly package with no per-seat licenses. Designed specifically for forensic analysts, UAS streamlines handling of base-by-base sequence information and contains a range of features to enable everything from efficient review of everyday STR profiles to detailed analysis of the most challenging samples.
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Reliant AI
Reliant AI
Accuracy, speed, confidence. Introducing generative AI to commercial biopharma. Simplify the labor-intensive process of collecting, organizing, and inspecting vast amounts of complex data. Get straight to decision-critical insights with 100% confidence, every time. With our AI-powered data manipulation and verification platform, you'll never lose track of your workstreams again. Gather, refine, and check your data, all in one place. Search public and private databases by key drug characteristics. Segment drugs and trials by detailed patient profiles. Extract the data you need in plain English. Support your findings by linking answers back to their source. Focus your time and energy on synthesizing high-quality outputs from data rather than menially sifting through it. Our specialized LLMs enable researchers to perform asset scans 4.8x faster than by hand. We index over 38M scientific publications, conference abstracts, and clinical trials. All the data you need, when you need it. -
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MediGrid
MediGrid
MediGrid has a smart data ingestion engine that not only structures your data well and helps to curate your data, it is also able to transform and harmonize your data. This allows researchers to conduct multi-study analyses or to review adverse effects across multiple studies for example. During various phases of your research you want a realtime view of the safety of all patients. Especially when it comes to monitoring of adverse effects (AE) and serious adverse events (SAE) before or after market introduction. MediGrid can help you monitor, detect and warn you about these safety risks. This will improve patient safety and prevent you from getting a bad reputation. MediGrid also does the heavy lifting in terms of collecting, classifying, harmonizing and reporting the safety data. -
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VarSeq
Golden Helix
Simple, fast, and repeatable variant analysis software for gene panels, exomes, and whole genomes. VarSeq is an intuitive, integrated software solution for tertiary analysis. With VarSeq you can automate your workflows and analyze variants for gene panels, exomes, and whole genomes. Understanding genomic data has never been easier thanks to our software. VarSeq software provides a powerful filtering and annotation engine to sift through large variant data sets. Using a chain of filters, you can quickly narrow your list of variants down to those that are most likely to be of interest. After determining the parameters that work well for your analysis, you can save the state of your filters so that you can easily apply the same analysis to another dataset. The same automated workflow can be used for each batch of samples, making VarSeq an ideal solution for high-throughput environments. Real-time filtering gives you the power to quickly prototype and tune analysis workflows. -
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CZ CELLxGENE Discover
CZ CELLxGENE
Select two custom cell groups based on metadata to find their top differentially expressed genes. Leverage millions of cells from the integrated CZ CELLxGENE corpus for powerful analysis. Execute interactive analyses on a dataset to explore how patterns of gene expression are determined by spatial, environmental, and genetic factors using an interactive speed no-code UI. Understand published datasets or use them as a launchpad to identify new cell sub-types and states. Census provides access to any custom slice of standardized cell data available on CZ CELLxGENE Discover in R and Python. Explore an interactive encyclopedia of 700+ cell types that provides detailed definitions, marker genes, lineage, and relevant datasets in one place. Browse and download hundreds of standardized data collections and 1,000+ datasets characterizing the functionality of healthy mouse and human tissues. -
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Signals Translational
PerkinElmer
With visual analytics powered by TIBCO Spotfire®, PerkinElmer Signals Translational provides all the necessary tools to harmonize, manage, search, aggregate and analyze data consistently across large datasets for use in translational research in a highly scalable manner. Powered by the industry-leading visual analytics platform TIBCO Spotfire®, Signals Translational enables precision medicine studies with the most advanced biomarker discovery and patient stratification solution available today. The Linear Mixed Effect App (LME) in Signals Translational allows scientists to rank the effect of multiple variables on a phenotype of interest, with the option to correct the effect of random variables in the analysis. The genes with the strongest impact on cancer stage progression can be identified independently of the origin of the patients. With the advantage of properly handling missing values and outliers, LME models are an effective tool to identify potential biomarkers. -
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BaseSpace Sequence Hub
Illumina
Data management and simplified bioinformatics for labs getting started and for rapidly scaling next-generation sequencing (NGS) operations. As a key component of the BaseSpace Suite, BaseSpace Sequence Hub is a direct extension of your Illumina instruments. Encrypted data flow from the instrument into BaseSpace Sequence Hub, enabling you to manage and analyze your data easily with a curated set of analysis apps. BaseSpace Sequence Hub is powered by Amazon Web Services (AWS). Offers a security-first environment. Enables you to set up runs and monitor instrument run quality. Promotes efficiency by converting sequencing data to a standard format and streaming directly to the cloud. Provides access to computing resources without the capital expenditure of in-house infrastructure. Increases organizational productivity with easy access to a multitude of genomic analysis apps (provided by you, Illumina, or third parties). -
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Synthace
Synthace
The Synthace digital experiment platform lets you design powerful experiments, run them in your lab, then automatically build structured data. Synthace DOE is an adaptive design of experiments solution that makes sophisticated, multifactor experiments available to anyone–all defined, executed, and analyzed in one place. High throughput DOE automation and data isn't a pipe dream, it's already here. Unleash your equipment to work full pelt on the hardest problems you need to solve today, tomorrow, and every other day after that. Run V1 in the morning, then V2 after lunch. With Synthace's dynamic automation, you can update your experiments as often as you like, without (re)writing code: run your experiments this way, then that way, then back again. Act on your decisions with lightning speed. Automatically gather and structure your experiment designs, experimental data, and metadata, all in one platform. -
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Eidogen-Sertanty Target Informatics Platform (TIP)
Eidogen-Sertanty
Eidogen-Sertanty's Target Informatics Platform (TIP) is the world's first structural informatics system and knowledgebase that enables researchers with the ability to interrogate the druggable genome from a structural perspective. TIP amplifies the rapidly expanding body of experimental protein structure information and transforms structure-based drug discovery from a low-throughput, data-scarce discipline into a high-throughput, data-rich science. Designed to help bridge the knowledge gap between bioinformatics and cheminformatics, TIP supplies drug discovery researchers with a knowledge base of information that is both distinct from and highly complementary to information furnished by existing bio- and cheminformatics platforms. TIP's seamless integration of structural data management technology with unique target-to-lead calculation and analysis capabilities enhances all stages of the discovery pipeline. -
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hc1
hc1
Founded to improve lives with high-value care, hc1 has emerged as the leader in bioinformatics for precision testing and prescribing. The cloud-based hc1 High-Value Care Platform® organizes volumes of live data, including lab results, genomics, and medications, to deliver solutions that ensure that the right patient gets the right test and the right prescription. Today, the hc1 Platform powers solutions that optimize diagnostic testing and prescribing for millions of patients nationally. To learn more about hc1's proven approach to personalizing care while eliminating waste for thousands of health systems, diagnostic laboratories, and health plans, visit www.hc1.com. -
42
Bioconductor
Bioconductor
The Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and data scientists. Resources to maximize the potential of Bioconductor. From basic functionalities to advanced features, our tutorials, guides, and documentation have you covered. Bioconductor uses the R statistical programming language and is open source and open development. It has two releases each year and an active user community. Bioconductor provides Docker images for every release and provides support for Bioconductor use in AnVIL. Founded in 2001, Bioconductor is an open-source software project widely used in bioinformatics and biomedical research. It hosts over 2,000 R packages contributed by over 1,000 developers, with over 40 million downloads per year. Bioconductor has been cited in more than 60,000 scientific publications.Starting Price: Free -
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Congenica
Congenica
We drive precision medicine and help reduce the burden on healthcare systems by delivering automated analysis, diagnosis, and treatment solutions to healthcare providers and patients worldwide. Congenica was founded on pioneering work at the Wellcome Sanger Institute and the UK NHS. Our products combine state-of-the-art technology, market-leading automation, and AI to enable our uniquely differentiated platform to be employed in all areas of human disease where genomic information is key to unlocking actionable insights. We are a digital health company providing software and solutions for the analysis and interpretation of genomic data at scale. Full automation with powerful APIs and ML to reduce the burden on specialist staff, maximize case throughput, accelerate decision-making, and streamline reporting. Certified, accurate, and secure analysis platform to support clinical decisions with the highest degree of confidence in the clinical outcome. -
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Over the last several years, the Life Sciences industry has faced nearly $15 billion in fines and compliance-related settlements, making it critical for companies to adhere to pharmaceutical, medical device and biotech best practices. Efficient and effective management of clinical trials can also significantly impact the time, scope and budget for the development of a drug or medical device. With OpenText™ Clinical Trial Quality Management System (ctQMS), companies can remain compliant, reduce costs of records management and establish best practice through collaboration before, during and after the clinical trial lifecycle.
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Galaxy
Galaxy
Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is utilizing infrastructure generously provided by the Texas Advanced Computing Center. Additional resources are provided primarily on the Jetstream2 cloud via ACCESS, and with support from the National Science Foundation. Quantify, visualize, and summarize mismatches in deep sequencing data. Build maximum-likelihood phylogenetic trees. Phylogenomic/evolutionary tree construction from multiple sequences. Merge matching reads into clusters with TN-93. Remove sequences from a reference that are within a given distance of a cluster. Perform maximum-likelihood estimation of gene essentiality scores.Starting Price: Free -
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QliqCHAT HIPAA-Compliant Texting
QliqSOFT
QliqCHAT Secure Texting is a real-time, secure, HIPAA-compliant healthcare communication platform that connects every care team member and facilitates effective, patient-focused collaboration. Securely bridge the communication and collaboration gap between doctors, nurses, patients, and caregivers. For more than a decade, QliqSOFT has helped healthcare organizations facilitate HIPAA-compliant, real-time communication exchange among healthcare practitioners and patients while automating routine clinical processes that bring immediate relief to overburdened employees while changing the way they work. QliqSOFT solutions assist over 1,000 healthcare organizations in realizing qualitative returns on their investment. -
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BC Platforms
BC Platforms
BC platforms leverages latest science, unique technology capabilities, and strategic partnerships to achieve our mission of revolutionizing drug discovery and personalizing care. Modular, highly configurable platform for integrated healthcare data. Open analytics framework seamlessly combining latest innovative methods, analytics and technology developments in one single platform. Superior security: ISO 27001 certified, GDPR and HIPAA compliance. Complete product portfolio enabling a modern healthcare system to fully embrace personalized medicine. Scalable deployments enabling a robust start as well as large scale healthcare operation. Accelerated translation of research insights into clinical practice with our unique end to end toolbox. We help reduce your risk, enhance your pipeline value and advance your enterprise data strategy by solving the barriers of data access and enabling rapid insight generation. -
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QMENTA
QMENTA
Globally accessible, infinitely scalable, AI-powered, collaborative cloud platform meeting the highest standards of security and compliance. An industry-leading and simple-to-use software platform, purpose-built by neuroimaging and data science experts to meet the distinct and challenging needs of the neuroscience community. Optimized and tailored for your needs, whether you are conducting research, running clinical trials, at the point of care, developing novel algorithms or leveraging brain-related data. Global data aggregation, and consolidation of imaging-based studies in one cloud platform. Streamlined, end-to-end clinical, real-world data and medical imaging data management. End-to-end expert and personalized support to ensure your study success. Centralized reading and the ability to compare quantitative results to a normative database. Highest quality, shareable reporting and data exporting for submissions approval. -
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prognosFACTOR
Prognos Health
The #1 source of purpose-built lab data, now with an entire ecosystem of healthcare data assets you need to answer even your most complex questions. Prognos was first to market, creating harmony between lab data types and extracting its complete analytical value in a powerful platform. Now we integrate that data with millions of medical and prescription claims in a health data marketplace and those sources are growing every day. Billions of data points at your fingertips including harmonized lab data on 325M patients, open and closed medical claims and prescription claims. Prognos Marketplace is a healthcare data marketplace that simplifies the data selection and contracting process by providing a self-service online destination where you can easily curate and purchase the health data you need when you need it. Start with the patient centric data that meets your business need. -
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MEGA
MEGA
MEGA (Molecular Evolutionary Genetics Analysis) is a powerful and user-friendly software suite designed for analyzing DNA and protein sequence data from species and populations. It facilitates both automatic and manual sequence alignment, phylogenetic tree inference, and evolutionary hypothesis testing. MEGA supports a variety of statistical methods including maximum likelihood, Bayesian inference, and ordinary least squares, making it an essential tool for comparative sequence analysis and understanding molecular evolution. MEGA offers advanced features such as real-time caption generation to help explain the results and methods used in analysis and the maximum composite likelihood method for estimating evolutionary distances. The software is equipped with robust visual tools like the alignment/trace editor and tree explorer and supports multi-threading for efficient processing. MEGA can be run on multiple operating systems, including Windows, Linux, and macOS.Starting Price: Free
