Audience

Labs interested in a solution to manage, analyze, and visualize their research data

About Loupe Browser

Loupe Browser is a powerful visualization software that provides the intuitive functionality you need to explore and analyze your 10x Genomics Chromium and Visium data. You can also convert your Seurat objects into Loupe Browser files using the LoupeR package. The navigation and interactive functionality of the Loupe Browser interface uses a lung squamous cell carcinoma dataset. The workspace is centered around the view panel in which single points representing cell barcodes are shown in a variety of projections. Each point represents a single barcode, the vast majority of which correspond to a single cell. The default projection is the t-SNE plot created by the cell ranger pipeline, though other projections are available. You can drag the mouse over the cells to reposition the plot and use the mouse wheel or trackpad to zoom in and out. Cluster labels appear as you move your mouse over the plot, which is useful for data that has a high number of precomputed clusters.

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Company Information

10x Genomics
Founded: 2012
United States
www.10xgenomics.com/support/software/loupe-browser/latest

Videos and Screen Captures

Loupe Browser Screenshot 1
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Product Details

Platforms Supported
Windows
Mac
Linux
Training
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Loupe Browser Frequently Asked Questions

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Loupe Browser Product Features