Nextflow

Nextflow

Seqera Labs
+
+

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About

Data-driven computational pipelines. Nextflow enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages. Its fluent DSL simplifies the implementation and deployment of complex parallel and reactive workflows on clouds and clusters. Nextflow is built around the idea that Linux is the lingua franca of data science. Nextflow allows you to write a computational pipeline by making it simpler to put together many different tasks. You may reuse your existing scripts and tools and you don't need to learn a new language or API to start using it. Nextflow supports Docker and Singularity containers technology. This, along with the integration of the GitHub code-sharing platform, allows you to write self-contained pipelines, manage versions, and rapidly reproduce any former configuration. Nextflow provides an abstraction layer between your pipeline's logic and the execution layer.

About

A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git. 🚀 batteries-included: replaces jupyter, streamlit, jupytext, ipywidgets, papermill, and more ⚡️ reactive: run a cell, and marimo reactively runs all dependent cells or marks them as stale 🖐️ interactive: bind sliders, tables, plots, and more to Python — no callbacks required 🔬 reproducible: no hidden state, deterministic execution, built-in package management 🏃 executable: execute as a Python script, parametrized by CLI args 🛜 shareable: deploy as an interactive web app or slides, run in the browser via WASM 🛢️ designed for data: query dataframes and databases with SQL, filter and search dataframes 🐍 git-friendly: notebooks are stored as .py files ⌨️ a modern editor: GitHub Copilot, AI assistants, vim keybindings, variable explorer, and more

Platforms Supported

Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook

Platforms Supported

Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook

Audience

Data scientists and developers seeking a solution to manage their data-driven computational pipelines

Audience

ML/AI engineers, data scientists, researchers, educators

Support

Phone Support
24/7 Live Support
Online

Support

Phone Support
24/7 Live Support
Online

API

Offers API

API

Offers API

Screenshots and Videos

Screenshots and Videos

No images available

Pricing

Free
Free Version
Free Trial

Pricing

$0
Free Version
Free Trial

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

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Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software

Training

Documentation
Webinars
Live Online
In Person

Training

Documentation
Webinars
Live Online
In Person

Company Information

Seqera Labs
Founded: 2018
Spain
nextflow.io

Company Information

marimo
Founded: 2022
United States
marimo.io

Alternatives

Alternatives

Thoa

Thoa

Thoa.io
Positron

Positron

Posit PBC
GenomiX

GenomiX

VE3 Global
Apache Airflow

Apache Airflow

The Apache Software Foundation

Categories

Categories

Data Management Features

Customer Data
Data Analysis
Data Capture
Data Integration
Data Migration
Data Quality Control
Data Security
Information Governance
Master Data Management
Match & Merge

Integrations

AWS Marketplace
Amazon Web Services (AWS)
Docker
GitHub
Google Cloud Platform
Illumina Connected Analytics
Kubernetes
Microsoft Azure
Python

Integrations

AWS Marketplace
Amazon Web Services (AWS)
Docker
GitHub
Google Cloud Platform
Illumina Connected Analytics
Kubernetes
Microsoft Azure
Python
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