Genome Analysis Toolkit (GATK)Broad Institute
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VlexPlusVLEXsoftware+consulting
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About
Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. The GATK is the industry standard for identifying SNPs and indels in germline DNA and RNAseq data. Its scope is now expanding to include somatic short variant calling and to tackle copy number (CNV) and structural variation (SV). In addition to the variant callers themselves, the GATK also includes many utilities to perform related tasks such as processing and quality control of high-throughput sequencing data and bundles the popular Picard toolkit. These tools were primarily designed to process exomes and whole genomes generated with Illumina sequencing technology, but they can be adapted to handle a variety of other technologies and experimental designs.
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About
Individual customer wishes are already part of everyday life today. But only those who are able to implement them efficiently and profitably can survive in the competition for new customers in the long term. Although most conventional ERP and PPC systems are capable of projecting variants via master data modifications, they will lack consistency across the entire quotation, planning and manufacturing process. Intelligent and firmly integrated variant management is required to render the growing data volume controllable across departments. VlexPlus has a trendsetting variant logic spanning all levels, from calculation via sales, purchasing and manufacturing up to controlling. Manufacturers can in this way prevent high set-up costs, incorrect delivery times, deviations between pre- and post-calculations, faulty designs or complex data maintenance from degrading their daily business to crisis management.
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Platforms Supported
Windows
Not Supported
Mac
Not Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Audience
Researchers wanting a solution to analyze, manage, and handle genome data
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Audience
Companies looking for an ERP solution
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Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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Support
Phone Support
Supported
24/7 Live Support
Not Supported
Online
Supported
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API
Offers API
Not Supported
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API
Offers API
Not Supported
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Screenshots and Videos |
Screenshots and Videos |
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Pricing
Free
Free Version
Supported
Free Trial
Not Supported
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Pricing
No information available.
Free Version
Not Supported
Free Trial
Not Supported
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Reviews/
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Reviews/
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Training
Documentation
Supported
Webinars
Supported
Live Online
Not Supported
In Person
Not Supported
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Training
Documentation
Not Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Not Supported
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Company InformationBroad Institute
United States
gatk.broadinstitute.org/hc/
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Company InformationVLEXsoftware+consulting
Founded: 1977
Germany
www.vlexplus.com/en/vlexplus-erp/variant-management
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Integrations
Docker
Not Supported
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