AlphaGenomeGoogle DeepMind
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Loupe Browser10x Genomics
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Related Products
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AlphaGenome:
About
AlphaGenome is a Google DeepMind API and Python toolkit for computational genomics research. Researchers submit DNA sequences or genetic variants to obtain model predictions about gene expression, RNA splicing, chromatin accessibility, transcription-factor binding, histone marks, and genome contacts. The API supports variant scoring and analyses of genomic regions in human and mouse data, with tutorials and reference materials for programmatic workflows. It can help researchers investigate how genetic changes may affect gene regulation and prioritize hypotheses for further study. Access is provided through a hosted API, with a Python package for local client-side use and notebook examples. AlphaGenome is intended for research and is not validated or approved for clinical or diagnostic use; its predictions should not be treated as clinical results.
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Loupe Browser:
About
Loupe Browser is a powerful visualization software that provides the intuitive functionality you need to explore and analyze your 10x Genomics Chromium and Visium data. You can also convert your Seurat objects into Loupe Browser files using the LoupeR package. The navigation and interactive functionality of the Loupe Browser interface uses a lung squamous cell carcinoma dataset. The workspace is centered around the view panel in which single points representing cell barcodes are shown in a variety of projections. Each point represents a single barcode, the vast majority of which correspond to a single cell. The default projection is the t-SNE plot created by the cell ranger pipeline, though other projections are available. You can drag the mouse over the cells to reposition the plot and use the mouse wheel or trackpad to zoom in and out. Cluster labels appear as you move your mouse over the plot, which is useful for data that has a high number of precomputed clusters.
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AlphaGenome:
Platforms Supported
Windows
Not Supported
Mac
Not Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Loupe Browser:
Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Not Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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AlphaGenome:
Audience
Computational biologists, genomics researchers, and research teams using programmatic DNA-sequence and genetic-variant analysis.
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Loupe Browser:
Audience
Labs interested in a solution to manage, analyze, and visualize their research data
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AlphaGenome:
Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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Loupe Browser:
Support
Phone Support
Supported
24/7 Live Support
Not Supported
Online
Supported
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AlphaGenome:
API
Offers API
Supported
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Loupe Browser:
API
Offers API
Not Supported
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AlphaGenome:
Screenshots and Videos |
Loupe Browser:
Screenshots and Videos |
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AlphaGenome:
PricingFree for non-commercial research use, subject to terms. Commercial research access is in private preview; commercial and enterprise workflows are also offered through Google Cloud.
Free Version
Supported
Free Trial
Not Supported
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Loupe Browser:
Pricing
No information available.
Free Version
Not Supported
Free Trial
Not Supported
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AlphaGenome:
Reviews/
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Loupe Browser:
Reviews/
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AlphaGenome:
Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Not Supported
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Loupe Browser:
Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Supported
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AlphaGenome:
Company InformationGoogle DeepMind
Founded: 2010
United Kingdom
deepmind.google/science/alphagenome/
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Loupe Browser:
Company Information10x Genomics
Founded: 2012
United States
www.10xgenomics.com/support/software/loupe-browser/latest
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AlphaGenome:
Alternatives |
Loupe Browser:
Alternatives |
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AlphaGenome:
Categories |
Loupe Browser:
Categories |
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AlphaGenome:
Integrations
Google Antigravity
Supported
Google Cloud Platform
Supported
Google Colab
Supported
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Loupe Browser:
Integrations
Google Antigravity
Not Supported
Google Cloud Platform
Not Supported
Google Colab
Not Supported
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AlphaGenome:
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Loupe Browser:
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