AlphaGenome

AlphaGenome

Google DeepMind
AlphaGenome CZ CELLxGENE Discover

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AlphaGenome:

About

AlphaGenome is a Google DeepMind API and Python toolkit for computational genomics research. Researchers submit DNA sequences or genetic variants to obtain model predictions about gene expression, RNA splicing, chromatin accessibility, transcription-factor binding, histone marks, and genome contacts. The API supports variant scoring and analyses of genomic regions in human and mouse data, with tutorials and reference materials for programmatic workflows. It can help researchers investigate how genetic changes may affect gene regulation and prioritize hypotheses for further study. Access is provided through a hosted API, with a Python package for local client-side use and notebook examples. AlphaGenome is intended for research and is not validated or approved for clinical or diagnostic use; its predictions should not be treated as clinical results.
CZ CELLxGENE Discover:

About

Select two custom cell groups based on metadata to find their top differentially expressed genes. Leverage millions of cells from the integrated CZ CELLxGENE corpus for powerful analysis. Execute interactive analyses on a dataset to explore how patterns of gene expression are determined by spatial, environmental, and genetic factors using an interactive speed no-code UI. Understand published datasets or use them as a launchpad to identify new cell sub-types and states. Census provides access to any custom slice of standardized cell data available on CZ CELLxGENE Discover in R and Python. Explore an interactive encyclopedia of 700+ cell types that provides detailed definitions, marker genes, lineage, and relevant datasets in one place. Browse and download hundreds of standardized data collections and 1,000+ datasets characterizing the functionality of healthy mouse and human tissues.
AlphaGenome:

Platforms Supported

Windows Not Supported
Mac Not Supported
Linux Not Supported
Cloud Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
CZ CELLxGENE Discover:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
AlphaGenome:

Audience

Computational biologists, genomics researchers, and research teams using programmatic DNA-sequence and genetic-variant analysis.
CZ CELLxGENE Discover:

Audience

Researchers searching for a solution to download, analyze, and visually explore data
AlphaGenome:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
CZ CELLxGENE Discover:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
AlphaGenome:

API

Offers API Supported
CZ CELLxGENE Discover:

API

Offers API Supported
AlphaGenome:

Screenshots and Videos

CZ CELLxGENE Discover:

Screenshots and Videos

AlphaGenome:

Pricing

Free for non-commercial research use, subject to terms. Commercial research access is in private preview; commercial and enterprise workflows are also offered through Google Cloud.
Free Version Supported
Free Trial Not Supported
CZ CELLxGENE Discover:

Pricing

No information available.
Free Version Not Supported
Free Trial Not Supported
AlphaGenome:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
CZ CELLxGENE Discover:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
AlphaGenome:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
CZ CELLxGENE Discover:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
AlphaGenome:

Company Information

Google DeepMind
Founded: 2010
United Kingdom
deepmind.google/science/alphagenome/
CZ CELLxGENE Discover:

Company Information

CZ CELLxGENE
United States
cellxgene.cziscience.com
AlphaGenome:

Alternatives

AlphaGenome 2

AlphaGenome 2

Google DeepMind
CZ CELLxGENE Discover:

Alternatives

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OmnibusX

OmnibusX Company Limited
5.0 out of 5 stars
AlphaGenome:
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VarSeq

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AlphaGenome:
XetaBase

XetaBase

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CZ CELLxGENE Discover:
GenomeStudio

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AlphaGenome:

Categories

CZ CELLxGENE Discover:

Categories

AlphaGenome:

Integrations

Google Antigravity Supported
Google Cloud Platform Supported
Google Colab Supported
Python Not Supported
R Not Supported
CZ CELLxGENE Discover:

Integrations

Google Antigravity Not Supported
Google Cloud Platform Not Supported
Google Colab Not Supported
Python Supported
R Supported
AlphaGenome:
Claim AlphaGenome and update features and information
Claim AlphaGenome and update features and information
CZ CELLxGENE Discover:
Claim CZ CELLxGENE Discover and update features and information
Claim CZ CELLxGENE Discover and update features and information