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yTOS enables transformation of metabolic pathways generated in yEd graph editor into a computational model defined by Systems Biology standards: SBGN (Systems Biology Graphical Notation) format and SBML (Systems Biology Markup Language) with CellDesigner annotations.
yTOS takes as input a graphML file.
The example of Glycolysis given with yTOS tool was adopted from http://www.sbgn.org/Documents/PD_L1_Examples .
Requirements: Java 1.8 is necessary.
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