The active use repository has migrated over to: https://github.com/darrenabbey/ymap

The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github.
--------

Eukaryotic pathogens have complicated and dynamic genomes.

To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of heterozygosity (LOH) events in Candida albicans, the most common human fungal pathogen, we developed a pipeline for analyzing diverse genome-scale datasets from microarray, deep sequencing, and restriction site associated DNA sequence experiments for clinical and laboratory strains. The YMAP pipeline automatically illustrates genome-wide information in a single intuitive figure and is readily modified for the analysis of other categories of data and other pathogen species with small genomes.

Project Samples

Project Activity

See All Activity >

Categories

Bio-Informatics

License

MIT License

Follow Ymap - Yeast Mapping Analysis Pipeline

Ymap - Yeast Mapping Analysis Pipeline Web Site

Other Useful Business Software
AI-powered service management for IT and enterprise teams Icon
AI-powered service management for IT and enterprise teams

Enterprise-grade ITSM, for every business

Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity. Maximize operational efficiency with refreshingly simple, AI-powered Freshservice.
Try it Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of Ymap - Yeast Mapping Analysis Pipeline!

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Other Audience

User Interface

Web-based

Programming Language

JavaScript, MATLAB, PHP, Python, Unix Shell

Related Categories

Unix Shell Bio-Informatics Software, MATLAB Bio-Informatics Software, Python Bio-Informatics Software, PHP Bio-Informatics Software, JavaScript Bio-Informatics Software

Registered

2014-06-02