The VAN package enables an integrative analysis of (i) gene expression data with protein-protein interaction networks or (ii) gene and microRNA expression data with microRNA-gene interaction networks to identify biologically perturbed networks.

Features

  • Hypothesis testing for network modules
  • Biomarker discovery
  • Integrative analysis of transcriptomics data and network data
  • Systems biology

Project Samples

Data analysis pipeline

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU Library or Lesser General Public License version 3.0 (LGPLv3)

Follow VariabilityAnalysisInNetworks

VariabilityAnalysisInNetworks Web Site

nel_h2
Gen AI apps are built with MongoDB Atlas Icon
Gen AI apps are built with MongoDB Atlas

Build gen AI apps with an all-in-one modern database: MongoDB Atlas

MongoDB Atlas provides built-in vector search and a flexible document model so developers can build, scale, and run gen AI apps without stitching together multiple databases. From LLM integration to semantic search, Atlas simplifies your AI architecture—and it’s free to get started.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of VariabilityAnalysisInNetworks!

Additional Project Details

Intended Audience

Science/Research

Programming Language

S/R

Related Categories

S/R Bio-Informatics Software

Registered

2013-08-10
Report inappropriate content