TABSAT - Targeted Amplicon Bisulfite Sequencing Analysis Tool
A tool for analyzing targeted bisulfite sequencing data generated on an Ion Torrent PGM / Illumina MiSeq. The workflow starts with raw sequencing data, performs quality assessment, and uses a tailored version of Bismark to map the reads to a reference genome. Results are aggregated across all samples, presented in table format, and visualized as lollipop plots. In addition, due to the long read length of Ion Torrent reads, the pipeline is able to deduce specific methylation-patterns present in a sample.
Please check out the Github page:
https://github.com/tadkeys/tabsat
Features
- Bisulfite Sequencing
- Data Analysis
- NGS
- Ion Torrent PGM
- MiSeq
- Methylation
Follow TABSAT
Other Useful Business Software
Grafana: The open and composable observability platform
Grafana is the open source analytics & monitoring solution for every database.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of TABSAT!
