Splicing Prediction Pipeline download

SPiP is a tool to predict the splice alteration of variant by integrate several prediction tool in a global pipeline.

You can also download SPiP in zip format: https://sourceforge.net/projects/splicing-prediction-pipeline/files/SPiP_alone_v2_1.zip

For Linux (GitHub): https://github.com/LBGC-CFB/SPiP

If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr

v2.1 corrected (07/2021) :
correction of score calculation
v2.1 (06/2021):
Most strigent on "Alter by complex event"
v2.0 (04/2021):
New SPiP with random forest modelization

old change detailled in https://sourceforge.net/projects/splicing-prediction-pipeline/files/changeLogBeforev2.0.txt

Project Samples

Splicing Prediction Pipeline Screenshot 3

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License

MIT License

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Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Programming Language

S/R

Related Categories

S/R Molecular Science Software

Registered

2019-01-08

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