snpEff is a fast variant effect predictor (SNP, MNP and InDels) for genomic data. It is integrated with Galaxy so it can be used either as a command line or as a web application.

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User Reviews

  • One of the best app for amateurs to play with genome data.
  • Best annotation app. We are happily using for ngs annotation. Author replied every email support request so fast and helpfully. Thanks again for great support, updates and features.
    1 user found this review helpful.
  • Great!
  • Great tools to predict variant impact using VCF file.
  • Very nice app :)
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Registered

2010-07-06