skewer - Browse /Benchmark at SourceForge.net

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Name	Modified	Size	InfoDownloads / Week
Parent folder
benchmark1-arabidopsis.thaliana-scripts.tar.gz	2014-05-19	5.1 kB	0
benchmark2-celegans-scripts.tar.gz	2014-05-19	2.5 kB	0
simulated-2M-answer.tar.gz	2013-11-15	205.0 MB	0
simulated-2M-read-pairs.tar.gz	2013-11-15	341.0 MB	0
Totals: 4 Items		546.0 MB	0

Skewer - A fast and accurate adapter trimmer for paired-end reads, version 0.2.1

Project folders
---------------
Binaries: binary codes of different versions of "skewer"
Matrix: examples for the matrix used in skewer
Benchmark: scripts and simulated data for benchmarking various mainstream adapter trimmers
Simulator: modified source of ART, a NGS reads simulator, to produce reads with adapter contaminants
Scripts: scripts for small-RNA data manipulation
skewer_manual.pdf: user manual of skewer

Source codes
------------
https://github.com/relipmoc/skewer

Citation
--------
If you find this tool useful, please cite this:
BMC Bioinformatics.2014, 15:182
DOI: 10.1186/1471-2105-15-182
URL: http://www.biomedcentral.com/1471-2105/15/182

Source: README.txt, updated 2016-03-08

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