Name | Modified | Size | Downloads / Week |
---|---|---|---|
Parent folder | |||
Human_SRR893046_expressed.gtf | 2017-07-27 | 1.8 MB | |
Mouse_ERR1830476_expressed.gtf | 2017-07-27 | 5.4 MB | |
Human_SRR944284_expressed.gtf | 2017-07-27 | 18.6 MB | |
Human_SRR4252152_expressed.gtf | 2017-07-27 | 13.2 MB | |
Totals: 4 Items | 39.0 MB | 0 |
============================== Release of scRNAss version 1.0 ============================== scRNAss is an efficient trascriptome assembler for single-cell RNA-seq data. It assembles transcripts from either single-end or paired-end reads using reference genome and transcriptome, and also accurately estimates their abundances. scRNAss works in two steps. 1) scRNAss_build generates index files using reference genome and transcriptome; 2) scRNAss then take as input single-cell RNA-seq reads and the index files to assemble expressed transcripts and estimate their abundances; Finally, it outputs all assembled candidate transcripts in GTF format. This software is free to use, modify, redistribute without any restrictions, except including the license provided with the distribution.