SHAP Files

What's Changed

Breaking changes

• Add deprecation warning to legacy bar plot, add migration guide to new Explainer API by @connortann in https://github.com/shap/shap/pull/3739

Added

• Added categorical support for shap.plots.scatter by @hypostulate in https://github.com/shap/shap/pull/3706
• Introduce vmax parameter in image plot by @sd3ntato in https://github.com/shap/shap/pull/2848
• New plotting API for beeswarm to accept and return axes by @chriscave in https://github.com/shap/shap/pull/3561
• Enabeling to create a beeswarm figure without sum of other features by @kalkairis in https://github.com/shap/shap/pull/2225
• New interface to customise visualisations by @connortann in https://github.com/shap/shap/pull/3788
• Allow custom styles for bar plot by @connortann in https://github.com/shap/shap/pull/3849
• TreeExplainer numerical sensitivity by @tylerjereddy in https://github.com/shap/shap/pull/3990
• Faster non-tree KernelExplainer by @tylerjereddy in https://github.com/shap/shap/pull/3944

Fixed

• Fix logit errors in KernelExplainer by @CloseChoice in https://github.com/shap/shap/pull/3917
• Fix TypeError in summary_plot by @bedapisl in https://github.com/shap/shap/pull/3738
• Re-vendor colorconv from skimage 0.24.0 by @connortann in https://github.com/shap/shap/pull/3785
• Fix label option for multiple rows in shap.plots.image by @SFatemehM in https://github.com/shap/shap/pull/3636
• Fix transformers by @costrau in https://github.com/shap/shap/pull/3578
• Fix OpChain repr for kwargs-only operations by @thatlittleboy in https://github.com/shap/shap/pull/3838
• Fix the wrong figure for multiclass in summary plot by @46319943 in https://github.com/shap/shap/pull/3836
• Fix summary plot issue for multiclass case by @CloseChoice in https://github.com/shap/shap/pull/3925
• Fix colormaps by @CloseChoice in https://github.com/shap/shap/pull/3909

Documentation

• Fixed error in documentation of shap.datasets.communitiesandcrime by @TommyGiak in https://github.com/shap/shap/pull/3846
• Fix column indices in Understanding Tree SHAP notebook by @operte in https://github.com/shap/shap/pull/3749
• Reformat the scatter notebook in API example by @Xovee in https://github.com/shap/shap/pull/3752
• Improved typing and docs for scatter plot by @connortann in https://github.com/shap/shap/pull/3811
• Use intersphinx for some external links by @thatlittleboy in https://github.com/shap/shap/pull/3851
• Pin docs dependencies for reproducibility by @connortann in https://github.com/shap/shap/pull/3885
• Fix typo in force plot with LightGBM and description by @davidefiocco in https://github.com/shap/shap/pull/3962
• Fix: fixed markdown issue with some sections title in the introductio… by @CSantos01 in https://github.com/shap/shap/pull/3957
• Fix comment for beeswarm plot in intro notebook by @davidefiocco in https://github.com/shap/shap/pull/3960

Maintenance

• Fix: explicitly set matplotlib interpolation rcParams in tests by @connortann in https://github.com/shap/shap/pull/3953

Other Changes

• Skip sentiment analysis test on MacOS runners by @connortann in https://github.com/shap/shap/pull/3955
• Remove deprecated unused code _build_delta_masked_inputs and Explainer._compute_main_effects by @connortann in https://github.com/shap/shap/pull/3856
• Improve handling of the approximate parameter to TreeExplainer for consistency, and deprecate the argument in the explainer's init method by @CloseChoice in https://github.com/shap/shap/pull/3834
• Refactor feature_perturbation in Tree explainers by @glemaitre in https://github.com/shap/shap/pull/2624
• Test decision plot by @CloseChoice in https://github.com/shap/shap/pull/3720
• Bump ruff, fix rule E721 by @connortann in https://github.com/shap/shap/pull/3751
• Refactor plot utils and colors by @thatlittleboy in https://github.com/shap/shap/pull/3833
• Refactor and optimize explanation ops by @thatlittleboy in https://github.com/shap/shap/pull/3850
• Fix CI feedstock build by @CloseChoice in https://github.com/shap/shap/pull/3862
• Add error to multi output cohort call by @CloseChoice in https://github.com/shap/shap/pull/3870
• Fix typo in beeswarm.ipynb by @kamurani in https://github.com/shap/shap/pull/3900
• DeepExplainer docstring improvements by @anitagraser in https://github.com/shap/shap/pull/3892
• Clear plot before generating new summary plots to avoid overlapping color bars by @chun61205 in https://github.com/shap/shap/pull/3921
• Support rng for summary_plot by @tylerjereddy in https://github.com/shap/shap/pull/3945
• Minor speedups in non-tree KernelExplainer by @tylerjereddy in https://github.com/shap/shap/pull/3983

New Contributors

• @bedapisl made their first contribution in https://github.com/shap/shap/pull/3738
• @operte made their first contribution in https://github.com/shap/shap/pull/3749
• @Xovee made their first contribution in https://github.com/shap/shap/pull/3752
• @hypostulate made their first contribution in https://github.com/shap/shap/pull/3706
• @SFatemehM made their first contribution in https://github.com/shap/shap/pull/3636
• @sd3ntato made their first contribution in https://github.com/shap/shap/pull/2848
• @chriscave made their first contribution in https://github.com/shap/shap/pull/3561
• @kalkairis made their first contribution in https://github.com/shap/shap/pull/2225
• @TommyGiak made their first contribution in https://github.com/shap/shap/pull/3846
• @46319943 made their first contribution in https://github.com/shap/shap/pull/3836
• @kamurani made their first contribution in https://github.com/shap/shap/pull/3900
• @anitagraser made their first contribution in https://github.com/shap/shap/pull/3892
• @chun61205 made their first contribution in https://github.com/shap/shap/pull/3921
• @davidefiocco made their first contribution in https://github.com/shap/shap/pull/3962
• @CSantos01 made their first contribution in https://github.com/shap/shap/pull/3957
• @Fredheda made their first contribution in https://github.com/shap/shap/pull/3984
• @tylerjereddy made their first contribution in https://github.com/shap/shap/pull/3945

Full Changelog: https://github.com/shap/shap/compare/v0.46.0...v0.47.0