PROPAB: Computation of Propensities and Other Properties from Segments of 3D structure of Proteins

Authors: Rifat Nawaz UL Islam1, Chittran Roy2, Parth Sarthi Sen Gupta3, Debanjan Mitra2, Sahini Banerjee4 and Amal Kumar Bandyopadhyay2*

1Department of Zoology, The University of Burdwan, West Bengal, 713104, India
2Department of Biotechnology, The University of Burdwan, West Bengal, 713104, India
3Department of Chemistry, IISER, Berhampur, Odisha, 760010, India
4Department of Biotechnology, Institute of Genetic Engineering, West Bengal, 700128, India
*Corresponding author

Features

  • Computes the propensity tables for helix, sheet and coil types from multiple 3D structure files following ab initio statistical procedure.
  • Incorporate %-composition and physicochemical properties along with residues propensities.
  • Prepares FASTA files for different segments (Helix, Strand and Coil) following exact order of their presence in the entire sequence.

Project Activity

See All Activity >

Follow PROPAB

PROPAB Web Site

Other Useful Business Software
Cut Data Warehouse Costs by 54% Icon
Cut Data Warehouse Costs by 54%

Easily migrate from Snowflake, Redshift, or Databricks with free tools.

BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
Try Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of PROPAB!

Additional Project Details

Registered

2018-05-02
Report inappropriate content