Nucleotide sequence detection Files

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Name	Modified	Size	InfoDownloads / Week
Nucleotide.tar.gz	2010-04-29	1.8 MB	1
Totals: 1 Item		1.8 MB	1

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HelSearch
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a script for automated trimming and validation of ESTs or other DNA sequences by screening for various contaminants, low quality and low-complexity sequences.
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ClustAGE
ClustAGE is a command-line tool built using the Perl scripting language for the purpose of analyzing and comparing accessory genomic elements (AGEs) between genomes. It takes as input sets of AGE nucleotide sequences previously identified from the genome sequences of two or more separate organisms. These AGE sequence sets can be extracted from complete or draft whole-genome nucleotide sequences using the previously-developed software tools Spine (https://github.com/egonozer/Spine) and AGEnt (https://github.com/egonozer/AGEnt). See README (https://sourceforge.net/p/clustage/code/ci/master/tree/README.md) for more information.
Protein And Nucleotide Data Archive
PANDA (Protein And Nucleotide Data Archive) unifies the archival of the sequences from Taxonomy,GenBank,RefSeq,UniProt,PDB,and PRF on a regular interval to build and maintain a Protein and Nucleotide data archive. This project is part of BRC project fund