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Home / benchmarkAssembler
Name Modified Size InfoDownloads / Week
Parent folder
README.txt 2023-01-11 440 Bytes
0
HG002_PacBio_k25w40p2.fa.gz 2023-01-11 1.6 GB
0
Zmays_PacBio_k25w40.fa.gz 2023-01-11 621.2 MB
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Rice20k_PacBio_k25w40.fa.gz 2023-01-11 117.2 MB
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Rice15k_PacBio_k25w40.fa.gz 2023-01-11 117.7 MB
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Drosophila_ONT_k15w30.fa.gz 2023-01-11 42.9 MB
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CHM13_ONT_k25w40.fa.gz 2023-01-11 858.0 MB
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CHM13_PacBio_k25w40.fa.gz 2023-01-11 855.3 MB
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Totals: 8 Items   4.2 GB 0 
Genome assemblies generated with NGSEP v4.3.1 for benchmarking.

Source of reads for each assembly:

Rice15k_PacBio: NCBI SRA SRR10188372
Rice20k_PacBio: NCBI Bioproject PRJNA558396
Zmays_PacBio: NCBI Bioproject PRJNA627939
CHM13_PacBio: NCBI Bioproject PRJNA530776
HG002_PacBio: NCBI Bioproject PRJNA586863
Drosophila_ONT: http://www.tgsbioinformatics.com/necat/
CHM13_ONT: https://github.com/marbl/CHM13/blob/master/Sequencing_data.md
Source: README.txt, updated 2023-01-11