NGSEP Files

NGSEP (Next Generation Sequencing Experience Platform)

Brought to you by: dfcruz00, jduitama, juandelahoz

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Name	Modified	Size	InfoDownloads / Week
Parent folder
README.txt	2023-01-11	440 Bytes	0
HG002_PacBio_k25w40p2.fa.gz	2023-01-11	1.6 GB	0
Zmays_PacBio_k25w40.fa.gz	2023-01-11	621.2 MB	0
Rice20k_PacBio_k25w40.fa.gz	2023-01-11	117.2 MB	0
Rice15k_PacBio_k25w40.fa.gz	2023-01-11	117.7 MB	0
Drosophila_ONT_k15w30.fa.gz	2023-01-11	42.9 MB	0
CHM13_ONT_k25w40.fa.gz	2023-01-11	858.0 MB	0
CHM13_PacBio_k25w40.fa.gz	2023-01-11	855.3 MB	0
Totals: 8 Items		4.2 GB	0

Genome assemblies generated with NGSEP v4.3.1 for benchmarking.

Source of reads for each assembly:

Rice15k_PacBio: NCBI SRA SRR10188372
Rice20k_PacBio: NCBI Bioproject PRJNA558396
Zmays_PacBio: NCBI Bioproject PRJNA627939
CHM13_PacBio: NCBI Bioproject PRJNA530776
HG002_PacBio: NCBI Bioproject PRJNA586863
Drosophila_ONT: http://www.tgsbioinformatics.com/necat/
CHM13_ONT: https://github.com/marbl/CHM13/blob/master/Sequencing_data.md

Source: README.txt, updated 2023-01-11

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