NGS_AMAS

All-Mapping tool using Adaptive Seeds

Brought to you by: nhtran

Add a Review

Downloads: 0 This Week

Last Update: 2015-08-04

Download

Get an email when there's a new version of NGS_AMAS

AMAS is designed to find all possible mapping locations of NGS reads in a reference genome with up to a given number of errors (mismatches+gaps).

AMAS features an efficient and accurate strategy of partition and filtration of adaptive seeds to speed up the read mapping while preserving the sensitivity.

Project Activity

See All Activity >

Follow NGS_AMAS

NGS_AMAS Web Site

Other Useful Business Software

Earn up to 16% annual interest with Nexo.

More flexibility. More control.

Generate interest, access liquidity without selling, and execute trades seamlessly. All in one platform. Geographic restrictions, eligibility, and terms apply.

Get started with Nexo.

Rate This Project

User Reviews

Be the first to post a review of NGS_AMAS!

Additional Project Details

Registered

2014-08-18

Report inappropriate content

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Recommended Projects

Blat-like Fast Accurate Search Tool
BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
VoltMR
Pure java NGS mapping soft run on Hadoop 2.0
BIP Utility Library
Generation of mnemonics, seeds, private/public keys and addresses
Burrows-Wheeler Aligner
BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
MRmap
Parametric MRI: T1 mapping, T2 mapping, T2* mapping