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Manual : Manual for the software - ESSENTIAL!!!

MRHMMs2 : Source codes and executable files corresponding to the
BIOINFORMATICS Software note.

MRHMMs1 : Source codes of the earliest version of MRHMMs.

R codes : Read the outputs and cacluate BIC for some models.

R comparision with rhmm: Results comparison from rhmm (R package) and MRHMMs.
Source: Readme.tex, updated 2013-11-21