mPUMA

mPUMA: microbial Profiling Using Metagenomic Assembly

This is a software package which was designed to allow researchers to profile microbial communities using a de novo assembly approach to form Operational Taxonomic Units (OTUs). While originally designed to support the analysis of cpn60 based amplicons, mPUMA can be used to analyze data from any suitable DNA barcode.

A manuscript describing mPUMA is currently being developed and will be submitted for peer review presently.

If you are interested in using mPUMA pre-publication please contact the project admin(s) with any questions.

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Other License

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Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2011-06-03

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