A Java sotware for viewing 3D molecule structure and plotting 2D density map. The atomic positions (coordinates) are read from files for the CRYSTAL and GAUSSIAN programs.

Supported files:

1. *.xyz (molecule cartesian coordinates file)
2. *.gjf (GAUSSIAN's input file)
3. *.out (CRYSTAL98&2k's scf or properties output file)
4. fort.25 (CRYSTAL98&2k's ECHG(Electronic Charge Density) outpit file with fort.25 format).

Molecule's 3D operations:

Left drag : free rotate
Right drag : zoom
Left drag + CTRL : rotate along X-axis
Left drag + SHIF T: rotate along Y-axis
Left drag + ALT : rotate along Z-axis
Left click : select and deselect atom
Right click : select and deselect atom and show selected atom's serial number
Doubble click : show all serial numbers
Doubble click + CTRL : show molecule's axes
When a atom is selected, you can see the distance between the two atoms by moving the mouse over the second atom.

Project Samples

3D structure Density map Settings Choosing color Menu

Project Activity

See All Activity >

Follow MoleculeViewer

MoleculeViewer Web Site

Other Useful Business Software
Gemini 3 and 200+ AI Models on One Platform Icon
Gemini 3 and 200+ AI Models on One Platform

Access Google's best plus Claude, Llama, and Gemma. Fine-tune and deploy from one console.

Build generative AI apps with Vertex AI. Switch between models without switching platforms.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of MoleculeViewer!

Additional Project Details

Registered

2016-11-02
Report inappropriate content