Download
The software builds 3D models of chromosomes or genome given chromosomal contacts data such as Hi-C, TCC, 5C. MOGEN was tested on simulated datasets. Using real Hi-C data of a human cell line, MOGEN built models that are consistent with knowledge about the genome of the cell line.
Detail on how to use it: https://github.com/BDM-Lab/MOGEN
It is published in Bioinformatics: http://bioinformatics.oxfordjournals.org/content/32/9/1286
Bioinformatics, Data Mining, Machine Learning (BDM) Laboratory,
Jianlin Cheng, PhD
Department of Computer Science
University of Missouri, Columbia
Email: chengji@missouri.edu
Features
- 3D genome, chromosome modeling
Project Samples
Follow MOGEN
Other Useful Business Software
$300 Free Credits for Your Google Cloud Projects
Launch your next project with $300 in free Google Cloud credits—no strings attached. Test, build, and deploy without risk. Use your credits across the entire Google Cloud platform to find what works best for your needs. After your credits are used, continue with always-free tier services. Only pay when you're ready to scale. Sign up in minutes and start exploring.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of MOGEN!
